The number of ORFs found = 1

ORF Gene Chromosome Start Coord Stop Coord Phenotype Spurious ORF Overlapping ORF Overlapping Spurious
YNL137C NAM9 XIV 370052 368592 viable
CYGD description: ribosomal protein, mitochondrial
SGD description1: protein biosynthesis; description2: structural protein of ribosome
YPD MitoP2 Saccharomyces Deletion Project

Growth Rates: Homozygous Diploid Pool
Time Course 1 Time Course 2 Homozygous Diploid: YNL137C
YPD click on image to enlarge
YPDGE
YPG
YPE
YPL
YPD.1DNP
YPD.25DNP
YPG.1DNP
YPG.25DNP
no. of probes0 0
tag measurements0 0
F-statistics
-log(p-value)
max. difference

Growth Rates: Heterozygous Diploid Pool
Time Course 1 Time Course 2 Heterozygous Diploid: YNL137C
YPD0.981443 1.005334 click on image to enlarge
YPDGE0.951039
YPG0.916793 0.924296
YPE0.853221
YPL0.854294
YPD.1DNP 0.993767
YPD.25DNP 0.973117
YPG.1DNP 0.896127
YPG.25DNP 0.883858
no. of probes3 3
tag measurements33 39
F-statistics10.572082 53.635466
-log(p-value)4.427768 13.332318
max. difference0.128222 0.121476

Proteomics Peptide Identifications
yplDG1me yplDG2me yplDG3me ypl01me ypl02me ypl14me ypl15me ypl01meFT ypl02meFT
01 10 00 00 0
yplDG1ma ypl01ma ypl02ma ypl14ma ypl15ma ypl01maFT ypl02maFT
00 02 10 0
ypd4me ypd13me ypd4ma ypd13ma
01 00
scl01me scl01meFT scl01ma scl01maFT
10 00
scd01me scd01meFT scd01ma scd01maFT
00 10

Mitochondrial Expression Data
YPD YPL SCD SCL YPL:YPD SCL:SCD
5620.815517.61 4268.063355.34 -1.02-1.27
For ratio calculations, if value < 0, denotes negative inverse of ratio

Phenotypes
CYGD slow growth phenotype catalog
CYGD respiratory deficient phenotype catalog
CYGD carbohydrate utilization defect phenotype catalog
MitoP
Mitoprot analysis of yeast genome
predicted length of signal peptide: 17
probability of mitochondrial import: 0.9840

Homology
homology to bacterial protein weak similarity to bacterial ribosomal S4 proteins similarity member of E.coli S4 superfamily
homology to R. prowazekii : CAA14805.1
R. prowazekii description: 30S RIBOSOMAL PROTEIN S4 (rpsD)
log10 R. prowazekii E-value: -8.000000

Two-hybrid Database
Biomolecular Interaction Network Database
Medline link


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