The number of ORFs found = 1

ORF Gene Chromosome Start Coord Stop Coord Phenotype Spurious ORF Overlapping ORF Overlapping Spurious
YNL037C IDH1 XIV 558998 557916 viable
CYGD description: isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial
SGD description1: tricarboxylic acid cycle; description2: isocitrate dehydrogenase (NAD+)
YPD MitoP2 Saccharomyces Deletion Project

Growth Rates: Homozygous Diploid Pool
Time Course 1 Time Course 2 Homozygous Diploid: YNL037C
YPD click on image to enlarge
YPDGE
YPG
YPE
YPL
YPD.1DNP
YPD.25DNP
YPG.1DNP
YPG.25DNP
no. of probes0 0
tag measurements0 0
F-statistics
-log(p-value)
max. difference

Growth Rates: Heterozygous Diploid Pool
Time Course 1 Time Course 2 Heterozygous Diploid: YNL037C
YPD0.963466 1.000829 click on image to enlarge
YPDGE0.975819
YPG0.978370 1.014299
YPE0.993058
YPL0.986873
YPD.1DNP 0.975007
YPD.25DNP 0.991699
YPG.1DNP 0.997768
YPG.25DNP 1.005764
no. of probes4 4
tag measurements43 52
F-statistics0.768006 1.981648
-log(p-value)0.256857 0.994790
max. difference0.029592 0.039292

Proteomics Peptide Identifications
yplDG1me yplDG2me yplDG3me ypl01me ypl02me ypl14me ypl15me ypl01meFT ypl02meFT
04 33 62 22 3
yplDG1ma ypl01ma ypl02ma ypl14ma ypl15ma ypl01maFT ypl02maFT
1721 1728 2521 4
ypd4me ypd13me ypd4ma ypd13ma
23 2920
scl01me scl01meFT scl01ma scl01maFT
413 2515
scd01me scd01meFT scd01ma scd01maFT
24 2617

Mitochondrial Expression Data
YPD YPL SCD SCL YPL:YPD SCL:SCD
10750.6318577.64 27414.4710537.55 1.73-2.60
For ratio calculations, if value < 0, denotes negative inverse of ratio

Phenotypes
CYGD respiratory deficient phenotype catalog
CYGD carbohydrate utilization defect phenotype catalog

Metabolism
CYGD carbohydrate metabolism functional catalog
MitoP
Mitoprot analysis of yeast genome
predicted length of signal peptide: 30
probability of mitochondrial import: 0.9495

Homology
homology to bacterial protein similarity 32% identical to E. coli NAD(P)(+)-dependent isocitrate dehydrogenase
homology to R. prowazekii : CAA14727.1
R. prowazekii description: ISOCITRATE DEHYDROGENASE (icd)
log10 R. prowazekii E-value: -46.000000

Other Expression Studies
found increased: yes
Reference

Two-hybrid Database
Biomolecular Interaction Network Database
Medline link


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