The number of ORFs found = 1

ORF Gene Chromosome Start Coord Stop Coord Phenotype Spurious ORF Overlapping ORF Overlapping Spurious
YJR048W CYC1 X 526027 526356 viable
CYGD description: cytochrome-c isoform 1
SGD description1: oxidative phosphorylation; description2:
YPD MitoP2 Saccharomyces Deletion Project

Growth Rates: Homozygous Diploid Pool
Time Course 1 Time Course 2 Homozygous Diploid: YJR048W
YPD0.977594 0.947166 click on image to enlarge
YPDGE0.976272 0.942273
YPG0.858189 0.773141
YPE0.813234 0.705991
YPL0.852657 0.767057
YPD.1DNP 0.953554
YPD.25DNP 0.972668
YPG.1DNP 0.703284
YPG.25DNP 0.647857
no. of probes2 2
tag measurements22 38
F-statistics22.658399 42.436505
-log(p-value)5.486550 12.592973
max. difference0.164359 0.324811

Growth Rates: Heterozygous Diploid Pool
Time Course 1 Time Course 2 Heterozygous Diploid: YJR048W
YPD0.996059 1.009496 click on image to enlarge
YPDGE0.986697
YPG0.974813 0.985592
YPE0.960128
YPL0.954761
YPD.1DNP 1.009373
YPD.25DNP 1.020503
YPG.1DNP 0.989295
YPG.25DNP 1.010993
no. of probes2 2
tag measurements22 26
F-statistics2.117666 3.273122
-log(p-value)0.889259 1.549568
max. difference0.041299 0.034912

Proteomics Peptide Identifications
yplDG1me yplDG2me yplDG3me ypl01me ypl02me ypl14me ypl15me ypl01meFT ypl02meFT
01 20 14 40 0
yplDG1ma ypl01ma ypl02ma ypl14ma ypl15ma ypl01maFT ypl02maFT
45 60 13 0
ypd4me ypd13me ypd4ma ypd13ma
01 21
scl01me scl01meFT scl01ma scl01maFT
79 37
scd01me scd01meFT scd01ma scd01maFT
05 00

Mitochondrial Expression Data
YPD YPL SCD SCL YPL:YPD SCL:SCD
6155.4725746.53 1409.977308.62 4.185.18
For ratio calculations, if value < 0, denotes negative inverse of ratio
MitoP
Mitoprot analysis of yeast genome
predicted length of signal peptide: 46
probability of mitochondrial import: 0.8500

Homology
homology to R. prowazekii : CAA14715.1
R. prowazekii description: CYTOCHROME C (cycM)
log10 R. prowazekii E-value: -19.397940

Other Expression Studies
found increased: yes
Reference

Two-hybrid Database
Biomolecular Interaction Network Database
Medline link


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