The number of ORFs found = 1

ORF Gene Chromosome Start Coord Stop Coord Phenotype Spurious ORF Overlapping ORF Overlapping Spurious
YHR120W MSH1 VIII 349576 352455 viable
CYGD description: DNA mismatch repair protein, mitochondrial
SGD description1: DNA repair; description2:
YPD MitoP2 Saccharomyces Deletion Project

Growth Rates: Homozygous Diploid Pool
Time Course 1 Time Course 2 Homozygous Diploid: YHR120W
YPD0.686061 0.662143 click on image to enlarge
YPDGE0.688974 0.667779
YPG0.648522 0.444429
YPE0.580262 0.421291
YPL0.610430 0.573607
YPD.1DNP 0.679243
YPD.25DNP 0.643428
YPG.1DNP 0.397753
YPG.25DNP 0.363036
no. of probes2 4
tag measurements20 50
F-statistics15.114000 12.744255
-log(p-value)4.085796 7.854288
max. difference0.108712 0.316207

Growth Rates: Heterozygous Diploid Pool
Time Course 1 Time Course 2 Heterozygous Diploid: YHR120W
YPD1.034186 0.991649 click on image to enlarge
YPDGE1.051914
YPG1.041142 0.991918
YPE1.071233
YPL1.054270
YPD.1DNP 1.001682
YPD.25DNP 0.996735
YPG.1DNP 1.022892
YPG.25DNP 0.997453
no. of probes4 4
tag measurements44 52
F-statistics2.727897 1.997317
-log(p-value)1.349872 1.005270
max. difference0.037047 0.031243

No Proteomics Data
Mitochondrial Expression Data
YPD YPL SCD SCL YPL:YPD SCL:SCD
2681.431781.60 2016.491745.47 -1.51-1.16
For ratio calculations, if value < 0, denotes negative inverse of ratio

Phenotypes
CYGD slow growth phenotype catalog
CYGD respiratory deficient phenotype catalog
CYGD carbohydrate utilization defect phenotype catalog
MitoP
Mitoprot analysis of yeast genome
predicted length of signal peptide: 22
probability of mitochondrial import: 0.9909

Homology
homology to bacterial protein similarity to B.subtilis MutS, Msh2p, human hMSH6. S.pombe swi4 protein and other G/T mismatch binding proteins
homology to R. prowazekii : CAA14759.1
R. prowazekii description: DNA MISMATCH REPAIR PROTEIN MUTS (mutS)
log10 R. prowazekii E-value: -97.698970

Two-hybrid Database
Biomolecular Interaction Network Database
Medline link


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