The number of ORFs found = 1

ORF Gene Chromosome Start Coord Stop Coord Phenotype Spurious ORF Overlapping ORF Overlapping Spurious
YDR116C IV 683574 682717 viable
CYGD description:
SGD description1: biological_process unknown; description2: molecular_function unknown
YPD MitoP2 Saccharomyces Deletion Project

Growth Rates: Homozygous Diploid Pool
Time Course 1 Time Course 2 Homozygous Diploid: YDR116C
YPD0.806268 0.795342 click on image to enlarge
YPDGE0.665222 0.750772
YPG0.665165 0.489682
YPE0.613002 0.465776
YPL0.718311 0.479079
YPD.1DNP 0.738695
YPD.25DNP 0.776065
YPG.1DNP 0.487404
YPG.25DNP 0.442503
no. of probes3 4
tag measurements19 51
F-statistics16.391012 36.192280
-log(p-value)3.877855 14.738665
max. difference0.193266 0.352839

Growth Rates: Heterozygous Diploid Pool
Time Course 1 Time Course 2 Heterozygous Diploid: YDR116C
YPD1.007890 1.000037 click on image to enlarge
YPDGE1.003193
YPG0.964556 0.941305
YPE0.974258
YPL0.926661
YPD.1DNP 0.991502
YPD.25DNP 1.010048
YPG.1DNP 0.947455
YPG.25DNP 0.904709
no. of probes4 4
tag measurements40 52
F-statistics3.689269 13.331208
-log(p-value)1.842926 7.071417
max. difference0.081229 0.105339

Proteomics Peptide Identifications
yplDG1me yplDG2me yplDG3me ypl01me ypl02me ypl14me ypl15me ypl01meFT ypl02meFT
00 00 00 00 0
yplDG1ma ypl01ma ypl02ma ypl14ma ypl15ma ypl01maFT ypl02maFT
11 20 00 0
ypd4me ypd13me ypd4ma ypd13ma
23 21
scl01me scl01meFT scl01ma scl01maFT
10 00
scd01me scd01meFT scd01ma scd01maFT
04 10

Mitochondrial Expression Data
YPD YPL SCD SCL YPL:YPD SCL:SCD
2552.923701.00 1656.741724.00 1.451.04
For ratio calculations, if value < 0, denotes negative inverse of ratio
Mitoprot analysis of yeast genome
0 0
probability of mitochondrial import: 0.8822

Homology
homology to bacterial protein similarity to bacterial ribosomal L1 proteins
homology to R. prowazekii : CAA14605.1
R. prowazekii description: 50S RIBOSOMAL PROTEIN L1 (rplA)
log10 R. prowazekii E-value: -17.154902

Two-hybrid Database
Biomolecular Interaction Network Database
Medline link


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