| ORF | Gene | Chromosome | Start Coord | Stop Coord | CYGD description | SGD description | respiratory deficient |
|---|---|---|---|---|---|---|---|
| YBL002W | HTB2 | II | 236454 | 236849 | histone H2B.2 | yes | |
| YBL003C | HTA2 | II | 235754 | 235356 | histone H2A.2 | yes | |
| YBL022C | PIM1 | II | 181237 | 177836 | ATP-dependent protease, mitochondrial | heat shock response | yes |
| YBL030C | PET9 | II | 163959 | 163003 | ADP/ATP carrier protein (MCF) | ATP/ADP exchange | yes |
| YBL080C | PET112 | II | 74689 | 73064 | required to maintain rho+ mitochondrial DNA | yes | |
| YBL099W | ATP1 | II | 37045 | 38682 | F1F0-ATPase complex, F1 alpha subunit | ATP synthesis coupled proton transport | yes |
| YBR037C | SCO1 | II | 311410 | 310523 | involved in stabilization of COX1P and COX2P | protein complex assembly | yes |
| YBR039W | ATP3 | II | 315534 | 316469 | F1F0-ATPase complex, F1 gamma subunit | ATP synthesis coupled proton transport | yes |
| YBR044C | TCM62 | II | 326019 | 324298 | chaperone required for assembly of mitochondrial succinate dehydrogenase | protein complex assembly | yes |
| YBR127C | VMA2 | II | 492780 | 491227 | H+-ATPase V1 domain 60 KD subunit, vacuolar | vacuolar acidification | yes |
| YBR143C | SUP45 | II | 532140 | 530827 | translational release factor | protein synthesis termination | yes |
| YBR146W | MRPS9 | II | 535218 | 536054 | ribosomal protein S9 precursor, mitochondrial | protein biosynthesis | yes |
| YBR179C | FZO1 | II | 589072 | 586505 | required for biogenesis of mitochondria | mitochondrion organization and biogenesis | yes |
| YBR185C | MBA1 | II | 599917 | 599081 | respiratory chain assembly protein | respiration | yes |
| YBR192W | RIM2 | II | 607610 | 608743 | mitochondrial carrier protein (MCF) | transport | yes |
| YCR003W | MRPL32 | III | 118614 | 119165 | ribosomal protein YmL32. mitochondrial | protein biosynthesis | yes |
| YCR009C | RVS161 | III | 131536 | 130739 | similarity to human amphiphysin and RVS167P | endocytosis | yes |
| YCR020C | PET18 | III | 154653 | 154006 | similarity to regulatory protein | yes | |
| YCR024C | III | 162214 | 160736 | asn-tRNA synthetase, mitochondrial | protein biosynthesis | yes | |
| YCR046C | IMG1 | III | 210415 | 209906 | ribosomal protein, mitochondrial | protein biosynthesis | yes |
| YCR071C | IMG2 | III | 240535 | 240095 | required for Integrity of Mitochondrial Genome | yes | |
| YDL004W | ATP16 | IV | 443025 | 443507 | F1F0-ATPase complex, F1 delta subunit | ATP synthesis coupled proton transport | yes |
| YDL006W | PTC1 | IV | 439905 | 440750 | protein serine/threonine phosphatase 2c | tRNA splicing | yes |
| YDL045W-A | MRP10 | IV | 372244 | 372531 | mitochondrial ribosomal protein | protein biosynthesis | yes |
| YDL120W | YFH1 | IV | 245922 | 246446 | regulates mitochondrial iron accumulation | yes | |
| YDL202W | MRPL11 | IV | 98476 | 99225 | ribosomal protein of the large subunit, mitochondrial | protein biosynthesis | yes |
| YDR079W | PET100 | IV | 603058 | 603393 | cytochrome-c oxidase assembly protein | cytochrome c oxidase biogenesis | yes |
| YDR172W | SUP35 | IV | 808317 | 810374 | eukaryotic peptide chain release factor GTP-binding subunit | protein synthesis termination | yes |
| YDR178W | SDH4 | IV | 817943 | 818488 | succinate dehydrogenase membrane anchor subunit for SDH2P | tricarboxylic acid cycle | yes |
| YDR225W | HTA1 | IV | 915521 | 915919 | histone H2A | yes | |
| YDR298C | ATP5 | IV | 1058805 | 1058167 | F1F0-ATPase complex, OSCP subunit | ATP synthesis coupled proton transport | yes |
| YDR322C-A | TIM11 | IV | 1112285 | 1111995 | subunit E of the dimeric form of mitochondrial F1F0-ATPase | ATP synthesis coupled proton transport | yes |
| YDR337W | MRPS28 | IV | 1146309 | 1147169 | ribosomal protein of the small subunit, mitochondrial | protein biosynthesis | yes |
| YDR347W | MRP1 | IV | 1169168 | 1170133 | ribosomal protein of the small subunit, mitochondrial | protein biosynthesis | yes |
| YDR375C | BCS1 | IV | 1226525 | 1225155 | mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases | respiration | yes |
| YDR377W | ATP17 | IV | 1228600 | 1228905 | ATP synthase complex, subunit f | ATP synthesis coupled proton transport | yes |
| YDR405W | MRP20 | IV | 1277635 | 1278426 | ribosomal protein of the large subunit, mitochondrial | protein biosynthesis | yes |
| YDR456W | NHX1 | IV | 1367474 | 1369375 | NA+-H+ antiporter | vacuolar acidification | yes |
| YDR529C | QCR7 | IV | 1496551 | 1496168 | ubiquinol--cytochrome-c reductase subunit 7 | yes | |
| YEL024W | RIP1 | V | 107260 | 107907 | ubiquinol--cytochrome-c reductase iron-sulfur protein precursor | yes | |
| YEL050C | RML2 | V | 60851 | 59670 | ribosomal L2 protein, mitochondrial | protein biosynthesis | yes |
| YEL059C-A | SOM1 | V | 42624 | 42400 | required for mitochondrial IMP1 peptidase function | yes | |
| YER014W | HEM14 | V | 182599 | 184218 | protoporphyrinogen oxidase, mitochondrial | yes | |
| YER017C | AFG3 | V | 191787 | 189502 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) | protein complex assembly | yes |
| YER058W | PET117 | V | 271766 | 272089 | cytochrome c oxidase assembly factor | cytochrome c oxidase biogenesis | yes |
| YER141W | COX15 | V | 453454 | 454914 | cytochrome oxidase assembly factor | cytochrome c oxidase biogenesis | yes |
| YER153C | PET122 | V | 474800 | 474036 | translational activator of cytochrome c oxidase subunit III | protein biosynthesis | yes |
| YER154W | OXA1 | V | 475015 | 476223 | cytochrome oxidase biogenesis protein | mitochondrial translocation | yes |
| YER178W | PDA1 | V | 546743 | 548074 | pyruvate dehydrogenase (lipoamide) alpha chain precursor | yes | |
| YFL016C | MDJ1 | VI | 106230 | 104695 | heat shock protein - chaperone | protein folding | yes |
| YFR033C | QCR6 | VI | 224756 | 224313 | ubiquinol--cytochrome-c reductase 17K protein | yes | |
| YGL018C | JAC1 | VII | 459660 | 459106 | molecular chaperone | aerobic respiration | yes |
| YGL040C | HEM2 | VII | 420552 | 419524 | porphobilinogen synthase | yes | |
| YGL119W | ABC1 | VII | 284443 | 285948 | ubiquinol--cytochrome-c reductase complex assembly protein | complex III (ubiquinone to cytochrome c) | yes |
| YGL191W | COX13 | VII | 144812 | 145201 | cytochrome-c oxidase chain VIa | yes | |
| YGR062C | COX18 | VII | 617272 | 616322 | required for activity of mitochondrial cytochrome oxidase | cytochrome c oxidase biogenesis | yes |
| YGR082W | TOM20 | VII | 644038 | 644589 | mitochondrial outer membrane import receptor subunit, 20 kD | mitochondrial translocation | yes |
| YGR112W | SHY1 | VII | 717352 | 718521 | SURF homologue protein | respiration | yes |
| YGR174C | CBP4 | VII | 846400 | 845888 | ubiquinol--cytochrome-c reductase assembly factor | protein complex assembly | yes |
| YGR180C | RNR4 | VII | 856296 | 855259 | ribonucleotide reductase small subunit | DNA replication | yes |
| YGR183C | QCR9 | VII | 859471 | 859058 | ubiquinol--cytochrome-c reductase subunit 9 | yes | |
| YGR222W | PET54 | VII | 939916 | 940797 | splicing protein and translational activator, mitochondrial | protein biosynthesis | yes |
| YGR244C | LSC2 | VII | 979315 | 978032 | succinate-CoA ligase beta subunit | tricarboxylic acid cycle | yes |
| YHL038C | CBP2 | VIII | 25506 | 23614 | apo-cytochrome b pre-mRNA processing protein 2 | yes | |
| YHR038W | FIL1 | VIII | 184057 | 184749 | Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C | protein biosynthesis | yes |
| YHR120W | MSH1 | VIII | 349576 | 352455 | DNA mismatch repair protein, mitochondrial | DNA repair | yes |
| YHR147C | MRPL6 | VIII | 393284 | 392640 | ribosomal protein of the large subunit, mitochondrial | protein biosynthesis | yes |
| YHR193C | EGD2 | VIII | 488232 | 487708 | similarity to human alpha-NAC | nascent polypeptide association | yes |
| YIL033C | BCY1 | IX | 291668 | 290418 | cAMP dependent protein kinase, regulatory subunit | stress response | yes |
| YIL051C | MMD1 | IX | 258279 | 257842 | required for maintenance of mitochondrial DNA | yes | |
| YIR021W | MRS1 | IX | 397291 | 398382 | involved in mitochondrial RNA splicing of COB mRNA | mRNA splicing | yes |
| YJL023C | PET130 | X | 398094 | 397051 | biological_process unknown | yes | |
| YJL063C | MRPL8 | X | 316171 | 315455 | ribosomal protein L17. mitochondrial | protein biosynthesis | yes |
| YJL095W | BCK1 | X | 246951 | 251387 | ser/thr protein kinase of the MEKK family | establishment of cell polarity (sensu Saccharomyces) | yes |
| YJL208C | NUC1 | X | 41183 | 40194 | nuclease, mitochondrial | DNA recombination | yes |
| YJL209W | CBP1 | X | 38005 | 39969 | apo-cytochrome b pre-mRNA processing protein | yes | |
| YJR034W | PET191 | X | 496375 | 496701 | involved in assembly of cytochrome oxidase | cytochrome c oxidase biogenesis | yes |
| YJR040W | GEF1 | X | 507438 | 509777 | voltage-gated chloride channel protein | transport | yes |
| YJR122W | CAF17 | X | 649469 | 650962 | CCR4 associated factor | yes | |
| YKL011C | CCE1 | XI | 420854 | 419793 | cruciform-cutting endonuclease, mitochondrial | tRNA processing | yes |
| YKL032C | IXR1 | XI | 381496 | 379703 | intrastrand crosslink recognition protein and transcription factor | yes | |
| YKL055C | OAR1 | XI | 335799 | 334963 | putative 3-oxoacyl-(acyl carrier protein) reductase | respiration | yes |
| YKL085W | MDH1 | XI | 278765 | 279769 | malate dehydrogenase precursor, mitochondrial | tricarboxylic acid cycle | yes |
| YKL087C | CYT2 | XI | 277505 | 276831 | holocytochrome-c1 synthase | yes | |
| YKL093W | MBR1 | XI | 264431 | 265450 | required for optimal growth on glycerol | yes | |
| YKL109W | HAP4 | XI | 231870 | 233534 | CCAAT-binding factor subunit | transcription | yes |
| YKL134C | 1-OCT | XI | 191440 | 189128 | mitochondrial intermediate peptidase | iron homeostasis | yes |
| YKL148C | SDH1 | XI | 171131 | 169209 | succinate dehydrogenase flavoprotein precursor | tricarboxylic acid cycle | yes |
| YKL154W | SRP102 | XI | 161603 | 162337 | signal recognition particle receptor, beta chain | yes | |
| YKL167C | MRP49 | XI | 134136 | 133723 | ribosomal protein, mitochondrial | protein biosynthesis | yes |
| YKL192C | ACP1 | XI | 80539 | 80162 | mitochonrial acyl-carrier protein | fatty acid biosynthesis | yes |
| YKL208W | CBT1 | XI | 47158 | 47973 | apo-cytochrome b pre-mRNA processing protein | yes | |
| YKR031C | SPO14 | XI | 506032 | 500981 | phospholipase D | yes | |
| YLL006W | MMM1 | XII | 136585 | 137865 | required for mitochondrial shape and structure | mitochondrion inheritance | yes |
| YLL009C | COX17 | XII | 131413 | 131204 | interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly | cytochrome c oxidase biogenesis | yes |
| YLL041C | SDH2 | XII | 53930 | 53130 | succinate dehydrogenase iron-sulfur protein subunit | tricarboxylic acid cycle | yes |
| YLR038C | COX12 | XII | 225173 | 224922 | cytochrome-c oxidase, subunit VIB | yes | |
| YLR067C | PET309 | XII | 270711 | 267814 | required for stability and translation of COX1 mRNA | protein biosynthesis | yes |
| YLR139C | SLS1 | XII | 423474 | 421543 | suppresses lethality of SSM4 deletion | yes | |
| YLR295C | ATP14 | XII | 722373 | 721999 | F1F0-ATPase complex, subunit h | ATP synthesis coupled proton transport | yes |
| YLR304C | ACO1 | XII | 737548 | 735212 | aconitate hydratase | tricarboxylic acid cycle | yes |
| YLR355C | ILV5 | XII | 839252 | 838065 | ketol-acid reducto-isomerase | yes | |
| YLR369W | SSQ1 | XII | 859551 | 861524 | mitochondrial heat shock protein 70 | DNA dependent DNA replication | yes |
| YLR377C | FBP1 | XII | 874791 | 873745 | fructos1.0e-1.6-bisphosphatase | gluconeogenesis | yes |
| YLR382C | NAM2 | XII | 884751 | 882067 | leucine--tRNA ligase precursor, mitochondrial | yes | |
| YLR439W | MRPL4 | XII | 1014486 | 1015445 | ribosomal protein, mitochondrial | protein biosynthesis | yes |
| YML078W | CPR3 | XIII | 111002 | 111550 | cyclophilin (peptidylprolyl isomerase), mitochondrial | protein folding | yes |
| YML081C-A | ATP18 | XIII | 104162 | 103983 | gene for subunit i/j of the mitochondrial F1F0-ATP synthase | ATP synthesis coupled proton transport | yes |
| YML091C | RPM2 | XIII | 90731 | 87123 | ribonuclease P precursor, mitochondrial | yes | |
| YML105C | SEC65 | XIII | 58687 | 57866 | signal recognition particle subunit | SRP-dependent, co-translational membrane targeting, signal sequence recognition | yes |
| YML110C | COQ5 | XIII | 50954 | 50031 | ubiquinone biosynthesis, methyltransferase | ubiquinone metabolism | yes |
| YML129C | COX14 | XIII | 14754 | 14542 | cytochrome-c oxidase assembly protein | respiration | yes |
| YMR021C | MAC1 | XIII | 318417 | 317164 | metal binding activator | yes | |
| YMR060C | TOM37 | XIII | 392514 | 391531 | mitochondrial outer membrane import receptor subunit, 37 kD | mitochondrial translocation | yes |
| YMR072W | ABF2 | XIII | 411568 | 412119 | high mobility group protein | mitochondrial genome maintenance | yes |
| YMR089C | YTA12 | XIII | 448085 | 445608 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) | protein complex assembly | yes |
| YMR145C | XIII | 556474 | 554792 | mitochondrial cytosolically directed NADH dehydrogenase | biological_process unknown | yes | |
| YMR152W | YIM1 | XIII | 563095 | 564192 | mitochondrial processing | yes | |
| YMR165C | SMP2 | XIII | 592627 | 590039 | involved in plasmid maintenance, respiration and cell proliferation | yes | |
| YMR228W | MTF1 | XIII | 724625 | 725650 | RNA polymerase specific factor, mitochondrial | transcription from mitochondrial promoter | yes |
| YMR241W | YHM2 | XIII | 751960 | 752904 | yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) | biological_process unknown | yes |
| YMR256C | COX7 | XIII | 779126 | 778944 | cytochrome-c oxidase, subunit VII | yes | |
| YMR257C | PET111 | XIII | 782030 | 779628 | required for translation of COX2 mRNA | protein biosynthesis | yes |
| YMR282C | AEP2 | XIII | 835098 | 833356 | required for the expression of subunit-9 of atp synthase | protein biosynthesis | yes |
| YMR287C | MSU1 | XIII | 845345 | 842436 | 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial | yes | |
| YMR301C | ATM1 | XIII | 869627 | 867555 | ATP-binding cassette transporter protein, mitochondrial | iron homeostasis | yes |
| YNL003C | PET8 | XIV | 625826 | 624972 | similarity to mitochondrial rat tricarboxylate transport protein precursor | biological_process unknown | yes |
| YNL005C | MRP7 | XIV | 622425 | 621310 | ribosomal protein YmL2 precursor, mitochondrial | protein biosynthesis | yes |
| YNL037C | IDH1 | XIV | 558998 | 557916 | isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial | tricarboxylic acid cycle | yes |
| YNL055C | POR1 | XIV | 518841 | 517990 | mitochondrial outer membrane porin | transport | yes |
| YNL137C | NAM9 | XIV | 370052 | 368592 | ribosomal protein, mitochondrial | protein biosynthesis | yes |
| YNR001C | CIT1 | XIV | 631058 | 629619 | citrate (si)-synthase, mitochondrial | tricarboxylic acid cycle | yes |
| YNR023W | SNF12 | XIV | 670415 | 672115 | component of SWI/SNF global transcription activator complex | chromatin modeling | yes |
| YNR045W | PET494 | XIV | 706136 | 707605 | translational activator, mitochondrial | protein biosynthesis | yes |
| YOL001W | PHO80 | XV | 325249 | 326130 | cyclin | cell cycle | yes |
| YOL025W | LAG2 | XV | 274957 | 276939 | involved in determining longevity | yes | |
| YOL096C | COQ3 | XV | 139056 | 138106 | enzyme of ubiquinone (coenzyme Q) biosynthesis | ubiquinone metabolism | yes |
| YOL147C | PEX11 | XV | 48641 | 47931 | peroxisomal membrane protein - peroxin | peroxisome organization and biogenesis | yes |
| YOR017W | PET127 | XV | 361411 | 363813 | component of mitochondrial translation system | RNA processing | yes |
| YOR125C | CAT5 | XV | 559847 | 559029 | involved in coenzyme Q (ubiquinone) biosynthesis | ubiquinone metabolism | yes |
| YOR136W | IDH2 | XV | 580249 | 581358 | isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial | tricarboxylic acid cycle | yes |
| YOR158W | PET123 | XV | 632163 | 633119 | ribosomal protein, mitochondrial | protein biosynthesis | yes |
| YOR196C | LIP5 | XV | 716836 | 715592 | lipoic acid synthase | fatty acid metabolism | yes |
| YOR201C | PET56 | XV | 721707 | 720469 | rRNA (guanosine-2'-O-)-methyltransferase | ribosomal large subunit assembly and maintenance | yes |
| YOR221C | MCT1 | XV | 757830 | 756475 | malonyl-CoA:ACP transferase | fatty acid metabolism | yes |
| YOR231W | MKK1 | XV | 772600 | 774126 | ser/thr protein kinase | protein phosphorylation | yes |
| YOR278W | HEM4 | XV | 842813 | 843640 | uroporphyrinogen III synthase | yes | |
| YOR330C | MIP1 | XV | 943455 | 939613 | DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial | DNA dependent DNA replication | yes |
| YOR332W | VMA4 | XV | 943648 | 944349 | H+-ATPase V1 domain 27 KD subunit, vacuolar | vacuolar acidification | yes |
| YOR334W | MRS2 | XV | 944588 | 946000 | RNA splicing protein and member of the mitochondrial carrier family (MCF) | mRNA splicing | yes |
| YOR355W | GDS1 | XV | 1005130 | 1006698 | NAM9-1 suppressor | yes | |
| YOR358W | HAP5 | XV | 1010154 | 1010882 | CCAAT-binding factor subunit | respiration | yes |
| YPL029W | SUV3 | XVI | 495502 | 497715 | ATP-dependent RNA helicase, mitochondrial | yes | |
| YPL040C | ISM1 | XVI | 478996 | 475988 | yes | ||
| YPL078C | ATP4 | XVI | 408739 | 408005 | F1F0-ATPase complex, F0 subunit B | ATP synthesis coupled proton transport | yes |
| YPL097W | MSY1 | XVI | 364947 | 366425 | yes | ||
| YPL104W | MSD1 | XVI | 355695 | 357671 | aspartate--tRNA ligase, mitochondrial | protein biosynthesis | yes |
| YPL118W | MRP51 | XVI | 326627 | 327661 | strong similarity to S.kluyveri hypothetical protein | protein biosynthesis | yes |
| YPL140C | MKK2 | XVI | 289033 | 287513 | protein kinase of the map kinase kinase (MEK) family | protein phosphorylation | yes |
| YPL148C | PPT2 | XVI | 272826 | 272293 | phosphopantetheine protein transferase | lipid transport | yes |
| YPL179W | PPQ1 | XVI | 208156 | 209805 | phosphoprotein phosphatase | translational regulation | yes |
| YPL254W | HFI1 | XVI | 69485 | 70951 | transcriptional coactivator | transcription | yes |
| YPL268W | PLC1 | XVI | 35236 | 37845 | 1-phosphatidylinositol-4.5-bisphosphate phosphodiesterase | pseudohyphal growth | yes |
| YPL271W | ATP15 | XVI | 30079 | 30267 | F1F0-ATPase complex, F1 epsilon subunit | ATP synthesis coupled proton transport | yes |
| YPR024W | YME1 | XVI | 610476 | 612719 | protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) | mitochondrion organization and biogenesis | yes |
| YPR051W | MAK3 | XVI | 664955 | 665485 | N-acetyltransferase | yes | |
| YPR088C | SRP54 | XVI | 713024 | 711399 | signal recognition particle subunit | yes | |
| YPR133W-A | TOM5 | XVI | 797552 | 797704 | mitochondrial outer membrane protein | mitochondrial translocation | yes |
| YPR166C | MRP2 | XVI | 876624 | 876277 | ribosomal protein S14 | protein biosynthesis | yes |
| YPR191W | QCR2 | XVI | 919376 | 920482 | ubiquinol--cytochrome-c reductase 40KD chain II | yes | |
| YPR198W | SGE1 | XVI | 934029 | 935660 | drug resistance protein | yes |