Class IIIa Candidates in the Yeast Deletion and Mitochondria (YDPM) Database
The number of ORFs found in the set = 214

ORF Gene Chromosome Start Coord Stop Coord CYGD description SGD description
YAL039C CYC3 I 69527 68718 holocytochrome-c synthase (cytochrome c heme lyase)

YAL044C GCV3 I 58485 57952 glycine decarboxylase, subunit H glycine metabolism

YBL007C SLA1 II 216327 212593 cytoskeleton assembly control protein cell wall organization and biogenesis

YBL021C HAP3 II 182056 181622 CCAAT-binding factor subunit transcription

YBL038W MRPL16 II 146149 146847 ribosomal protein of the large subunit, mitochondrial protein biosynthesis

YBL045C COR1 II 135478 134105 ubiquinol--cytochrome-c reductase 44K core protein

YBL080C PET112 II 74689 73064 required to maintain rho+ mitochondrial DNA

YBL090W MRP21 II 48819 49352 Mitochondrial ribosomal protein protein biosynthesis

YBL099W ATP1 II 37045 38682 F1F0-ATPase complex, F1 alpha subunit ATP synthesis coupled proton transport

YBL100C II 37295 36981 biological_process unknown

YBR003W COQ1 II 242770 244191 hexaprenyl pyrophosphate synthetase precursor ubiquinone metabolism

YBR026C (MRF1) II 293978 292836 mitochondrial respiratory function protein respiration

YBR035C PDX3 II 306914 306228 pyridoxamine-phosphate oxidase

YBR037C SCO1 II 311410 310523 involved in stabilization of COX1P and COX2P protein complex assembly

YBR044C TCM62 II 326019 324298 chaperone required for assembly of mitochondrial succinate dehydrogenase protein complex assembly

YBR163W DEM1 II 565681 567438 weak similarity to PTA1P (pre-tRNA processing protein) biological_process unknown

YBR179C FZO1 II 589072 586505 required for biogenesis of mitochondria mitochondrion organization and biogenesis

YCR003W MRPL32 III 118614 119165 ribosomal protein YmL32. mitochondrial protein biosynthesis

YCR009C RVS161 III 131536 130739 similarity to human amphiphysin and RVS167P endocytosis

YCR028C-A RIM1 III 173432 172942 ssDNA-binding protein, mitochondrial

YCR071C IMG2 III 240535 240095 required for Integrity of Mitochondrial Genome

YDL032W IV 393686 393997 biological_process unknown

YDL033C IV 393908 392655

YDL044C MTF2 IV 375285 373963 mitochondrial protein involved in mRNA splicing and protein synthesis mRNA processing

YDL067C COX9 IV 334395 334216 cytochrome-c oxidase chain VIIA

YDL068W IV 333499 333828 biological_process unknown

YDL069C CBS1 IV 333821 333120 translational activator of COB mRNA protein biosynthesis

YDL104C QRI7 IV 274875 273652 biological_process unknown

YDL198C YHM1 IV 104552 103650 member of the mitochondrial carrier family (MCF) transport

YDL202W MRPL11 IV 98476 99225 ribosomal protein of the large subunit, mitochondrial protein biosynthesis

YDR079W PET100 IV 603058 603393 cytochrome-c oxidase assembly protein cytochrome c oxidase biogenesis

YDR114C IV 682219 681917 biological_process unknown

YDR116C IV 683574 682717 biological_process unknown

YDR148C KGD2 IV 755059 753668 2-oxoglutarate dehydrogenase complex E2 component tricarboxylic acid cycle

YDR197W CBS2 IV 851220 852389 cytochrome B translational activator protein protein biosynthesis

YDR204W COQ4 IV 858129 859136 ubiquinone metabolism

YDR230W IV 926214 926561 biological_process unknown

YDR231C COX20 IV 926901 926284 in the maturation and assembly of cytochrome oxidase involved protein respiration

YDR237W MRPL7 IV 936606 937484 protein biosynthesis

YDR268W MSW1 IV 1003995 1005134 tryptophanyl-tRNA synthetase, mitochondrial

YDR270W CCC2 IV 1005666 1008680 probable copper-transporting ATPase

YDR337W MRPS28 IV 1146309 1147169 ribosomal protein of the small subunit, mitochondrial protein biosynthesis

YDR350C TCM10 IV 1178163 1176328 hypothetical protein biological_process unknown

YDR388W RVS167 IV 1250175 1251623 reduced viability upon starvation protein endocytosis

YDR462W MRPL28 IV 1386062 1386505 protein biosynthesis

YDR477W SNF1 IV 1412360 1414261 carbon catabolite derepressing ser/thr protein kinase protein phosphorylation

YDR494W IV 1436917 1437783 biological_process unknown

YDR507C GIN4 IV 1465789 1462361 ser/thr protein kinase protein phosphorylation

YDR509W IV 1468229 1468576 biological_process unknown

YDR512C IV 1471066 1470503 biological_process unknown

YDR518W EUG1 IV 1478611 1480164 protein disulfide isomerase

YDR533C IV 1502163 1501450 biological_process unknown

YEL024W RIP1 V 107260 107907 ubiquinol--cytochrome-c reductase iron-sulfur protein precursor

YEL050C RML2 V 60851 59670 ribosomal L2 protein, mitochondrial protein biosynthesis

YER017C AFG3 V 191787 189502 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) protein complex assembly

YER028C V 211875 210691 similarity to MIG1P biological_process unknown

YER050C RSM18 V 254578 253970 component of the mitochondrial ribosomal small subunit

YER058W PET117 V 271766 272089 cytochrome c oxidase assembly factor cytochrome c oxidase biogenesis

YER061C CEM1 V 279624 278296 beta-keto-acyl-ACP synthase, mitochondrial hexadecanal biosynthesis

YER122C GLO3 V 404348 402867 zinc finger protein ER to Golgi transport

YER141W COX15 V 453454 454914 cytochrome oxidase assembly factor cytochrome c oxidase biogenesis

YER153C PET122 V 474800 474036 translational activator of cytochrome c oxidase subunit III protein biosynthesis

YFL016C MDJ1 VI 106230 104695 heat shock protein - chaperone protein folding

YFL018C LPD1 VI 103121 101622 dihydrolipoamide dehydrogenase precursor serine biosynthesis

YGL064C VII 383206 381521 similarity to YLR276c and YKR024c biological_process unknown

YGL071W RCS1 VII 372010 374082 iron-regulated transcriptional repressor iron transport

YGL095C VPS45 VII 330605 328872 vacuolar protein sorting-associated protein Golgi to vacuole transport

YGL107C VII 306271 304331 biological_process unknown

YGL115W SNF4 VII 292031 292999 nuclear regulatory protein

YGL129C RSM23 VII 269192 267726 similarity to S.pombe hypothetical protein SPBC29A3.15C - putative mitochondrial function

YGL237C HAP2 VII 53528 52731 CCAAT-binding factor subunit

YGR062C COX18 VII 617272 616322 required for activity of mitochondrial cytochrome oxidase cytochrome c oxidase biogenesis

YGR076C MRPL25 VII 637571 637098 protein biosynthesis

YGR102C VII 695129 694578 biological_process unknown

YGR112W SHY1 VII 717352 718521 SURF homologue protein respiration

YGR150C VII 793048 790454 biological_process unknown

YGR165W VII 829111 830148 biological_process unknown

YGR171C MSM1 VII 842546 840819 methionyl-tRNA synthetase

YGR174C CBP4 VII 846400 845888 ubiquinol--cytochrome-c reductase assembly factor protein complex assembly

YGR183C QCR9 VII 859471 859058 ubiquinol--cytochrome-c reductase subunit 9

YGR215W RSM27 VII 922170 922502 strong similarity to hypothetical S. pombe protein

YGR220C MRPL9 VII 936876 936067 ribosomal protein of the large subunit, mitochondrial protein biosynthesis

YGR222W PET54 VII 939916 940797 splicing protein and translational activator, mitochondrial protein biosynthesis

YGR255C COQ6 VII 1003958 1002519 monooxygenase ubiquinone metabolism

YHL005C VIII 99214 98822 biological_process unknown

YHL038C CBP2 VIII 25506 23614 apo-cytochrome b pre-mRNA processing protein 2

YHR008C SOD2 VIII 123583 122882 superoxide dismutase (Mn) precursor, mitochondrial

YHR011W DIA4 VIII 127772 129112 strong similarity to seryl-tRNA synthetases pseudohyphal growth

YHR116W VIII 341667 342122 biological_process unknown

YIL093C RSM25 IX 188781 187987 weak similarity to S.pombe hypothetical protein SPBC16A3

YIL125W KGD1 IX 122689 125733 2-oxoglutarate dehydrogenase complex E1 component tricarboxylic acid cycle

YIL154C (IMP2) IX 55021 53981 sugar utilization regulatory protein DNA repair

YIL157C IX 47542 46949 biological_process unknown

YIR021W MRS1 IX 397291 398382 involved in mitochondrial RNA splicing of COB mRNA mRNA splicing

YJL003W X 432336 432692 biological_process unknown

YJL022W X 397805 398113 biological_process unknown

YJL023C PET130 X 398094 397051 biological_process unknown

YJL046W X 351956 353311 similarity to E.coli lipoate-protein ligase A biological_process unknown

YJL096W MRPL49 X 245998 246672 ribosomal protein YmL49. mitochondrial protein biosynthesis

YJL102W MEF2 X 230998 233457 protein synthesis elongation

YJL166W QCR8 X 106426 106710 ubiquinol--cytochrome-c reductase chain VIII

YJL180C ATP12 X 88558 87581 F1F0-ATPase complex assembly protein protein complex assembly

YJL209W CBP1 X 38005 39969 apo-cytochrome b pre-mRNA processing protein

YJR077C MIR1 X 577882 576947 phosphate transport protein, mitochondrial (MCF) phosphate transport

YJR113C RSM7 X 638668 637925 similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7

YJR120W X 646819 647169 hypothetical protein biological_process unknown

YJR121W ATP2 X 647300 648835 F1F0-ATPase complex, F1 beta subunit ATP synthesis coupled proton transport

YJR144W MGM101 X 700575 701384 mitochondrial genome maintenance protein mitochondrial genome maintenance

YKL002W DID4 XI 437416 438182 class E vacuolar-protein sorting and endocytosis factor biological_process unknown

YKL016C ATP7 XI 407627 407103 F1F0-ATPase complex, FO D subunit ATP synthesis coupled proton transport

YKL055C OAR1 XI 335799 334963 putative 3-oxoacyl-(acyl carrier protein) reductase respiration

YKL087C CYT2 XI 277505 276831 holocytochrome-c1 synthase

YKL109W HAP4 XI 231870 233534 CCAAT-binding factor subunit transcription

YKL138C MRPL31 XI 185683 185288 ribosomal protein YmL31, mitochondrial protein biosynthesis

YKL148C SDH1 XI 171131 169209 succinate dehydrogenase flavoprotein precursor tricarboxylic acid cycle

YKL155C RSM22 XI 161344 159458 similarity to S. pombe SPAC1420.04c putative cytochrome c oxidase assembly protein

YKL167C MRP49 XI 134136 133723 ribosomal protein, mitochondrial protein biosynthesis

YKL208W CBT1 XI 47158 47973 apo-cytochrome b pre-mRNA processing protein

YLL006W MMM1 XII 136585 137865 required for mitochondrial shape and structure mitochondrion inheritance

YLL009C COX17 XII 131413 131204 interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly cytochrome c oxidase biogenesis

YLL018C-A COX19 XII 108971 108675 similarity to hypothetical S. pombe protein (YEB7)

YLL027W ISA1 XII 87402 88154 similarity to H.influenzae and E.coli hypothetical proteins iron transport

YLL033W XII 73408 74100 biological_process unknown

YLL041C SDH2 XII 53930 53130 succinate dehydrogenase iron-sulfur protein subunit tricarboxylic acid cycle

YLR038C COX12 XII 225173 224922 cytochrome-c oxidase, subunit VIB

YLR083C EMP70 XII 296095 294092 endosomal protein

YLR091W XII 322298 323179 hypothetical protein biological_process unknown

YLR139C SLS1 XII 423474 421543 suppresses lethality of SSM4 deletion

YLR201C XII 550295 549513 biological_process unknown

YLR202C XII 550638 550196 biological_process unknown

YLR203C MSS51 XII 551962 550652 possibly involved in translational activation of COX1 and COB mRNA protein biosynthesis

YLR204W QRI5 XII 552272 552607 weak similarity to YOR309c biological_process unknown

YLR239C LIP2 XII 617318 616332 biological_process unknown

YLR304C ACO1 XII 737548 735212 aconitate hydratase tricarboxylic acid cycle

YLR368W XII 857539 859335 weak similarity to Mus musculus F-box protein FBA biological_process unknown

YLR393W ATP10 XII 907078 907917 F1F0 ATPase complex assembly protein protein complex assembly

YML061C PIF1 XIII 151532 148953 DNA helicase involved in mitochondrial DNA repair and telomere length DNA recombination

YML081C-A ATP18 XIII 104162 103983 gene for subunit i/j of the mitochondrial F1F0-ATP synthase ATP synthesis coupled proton transport

YML110C COQ5 XIII 50954 50031 ubiquinone biosynthesis, methyltransferase ubiquinone metabolism

YML120C NDI1 XIII 29807 28266 complex I (NADH to ubiquinone)

YML129C COX14 XIII 14754 14542 cytochrome-c oxidase assembly protein respiration

YMR021C MAC1 XIII 318417 317164 metal binding activator

YMR035W IMP2 XIII 341141 341674 mitochondrial inner membrane protease subunit mitochondrial processing

YMR063W RIM9 XIII 397076 397795 regulator for sporulation and invasive growth

YMR064W AEP1 XIII 397902 399458 nuclear control of ATPase messenger RNA expression protein protein biosynthesis

YMR072W ABF2 XIII 411568 412119 high mobility group protein mitochondrial genome maintenance

YMR098C XIII 462608 460770 biological_process unknown

YMR138W CIN4 XIII 545154 545729 GTP-binding protein microtubule-based process

YMR150C IMP1 XIII 562527 561955 protease, mitochondrial mitochondrial processing

YMR151W YIM2 XIII 562505 562942 biological_process unknown

YMR158W XIII 572247 572714 biological_process unknown

YMR257C PET111 XIII 782030 779628 required for translation of COX2 mRNA protein biosynthesis

YMR267W PPA2 XIII 801771 802703 inorganic pyrophosphatase, mitochondrial respiration

YMR285C NGL2 XIII 841691 840144 similarity to CCR4P biological_process unknown

YMR286W MRPL33 XIII 841942 842202 ribosomal protein of the large subunit, mitochondrial protein biosynthesis

YMR287C MSU1 XIII 845345 842436 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial

YNL005C MRP7 XIV 622425 621310 ribosomal protein YmL2 precursor, mitochondrial protein biosynthesis

YNL052W COX5A XIV 531721 532182 cytochrome-c oxidase chain V.A precursor

YNL073W MSK1 XIV 488383 490113

YNL170W XIV 315975 316370 biological_process unknown

YNL177C XIV 304612 303683 similarity to hypothetical protein S. pombe biological_process unknown

YNL184C XIV 292880 292554 biological_process unknown

YNL252C MRPL17 XIV 172285 171440 ribosomal protein of the large subunit (YmL30), mitochondrial protein biosynthesis

YNL315C ATP11 XIV 44279 43323 F1F0-ATPase complex assembly protein protein complex assembly

YNR020C XIV 668219 667407 similarity to hypothetical metalloproteinase S. pombe biological_process unknown

YNR036C XIV 694819 694358 biological_process unknown

YNR037C RSM19 XIV 695324 695049

YNR041C COQ2 XIV 701656 700538 para-hydroxybenzoate--polyprenyltransferase ubiquinone metabolism

YNR042W XIV 701235 701663 biological_process unknown

YNR045W PET494 XIV 706136 707605 translational activator, mitochondrial protein biosynthesis

YOL008W XV 310312 310935 similarity to hypothetical protein S. pombe biological_process unknown

YOL009C MDM12 XV 310139 309324 involved in mitochondrial inheritance mitochondrion inheritance

YOL027C XV 273724 272003 similarity to YPR125w biological_process unknown

YOL071W XV 196506 196994 biological_process unknown

YOL095C HMI1 XV 141346 139226 mitochondrial DNA helicase biological_process unknown

YOL096C COQ3 XV 139056 138106 enzyme of ubiquinone (coenzyme Q) biosynthesis ubiquinone metabolism

YOR065W CYT1 XV 447440 448369 oxidative phosphorylation

YOR135C XV 580499 580158 biological_process unknown

YOR136W IDH2 XV 580249 581358 isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial tricarboxylic acid cycle

YOR150W MRPL23 XV 611998 612489 protein biosynthesis

YOR196C LIP5 XV 716836 715592 lipoic acid synthase fatty acid metabolism

YOR200W XV 720416 720814 biological_process unknown

YOR201C PET56 XV 721707 720469 rRNA (guanosine-2'-O-)-methyltransferase ribosomal large subunit assembly and maintenance

YOR205C XV 727233 725563 hypothetical protein biological_process unknown

YOR211C MGM1 XV 741631 738923 dynamin-like protein mitochondrion organization and biogenesis

YOR221C MCT1 XV 757830 756475 malonyl-CoA:ACP transferase fatty acid metabolism

YOR241W MET7 XV 786994 788640 tetrahydrofolylpolyglutamate synthase

YOR305W XV 889015 889743 biological_process unknown

YOR330C MIP1 XV 943455 939613 DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial DNA dependent DNA replication

YOR332W VMA4 XV 943648 944349 H+-ATPase V1 domain 27 KD subunit, vacuolar vacuolar acidification

YOR333C XV 944949 944533 biological_process unknown

YOR350C MNE1 XV 994847 992856 biological_process unknown

YPL005W XVI 548481 550301 biological_process unknown

YPL013C XVI 529345 528980 strong similarity to N.crassa mitochondrial ribosomal protein S24 biological_process unknown

YPL029W SUV3 XVI 495502 497715 ATP-dependent RNA helicase, mitochondrial

YPL040C ISM1 XVI 478996 475988

YPL060W LPE10 XVI 434518 435759 mitochondrial inner membrane protein biological_process unknown

YPL078C ATP4 XVI 408739 408005 F1F0-ATPase complex, F0 subunit B ATP synthesis coupled proton transport

YPL097W MSY1 XVI 364947 366425

YPL104W MSD1 XVI 355695 357671 aspartate--tRNA ligase, mitochondrial protein biosynthesis

YPL118W MRP51 XVI 326627 327661 strong similarity to S.kluyveri hypothetical protein protein biosynthesis

YPL132W COX11 XVI 301715 302617 cytochrome-c oxidase assembly protein respiration

YPL172C COX10 XVI 225740 224352 farnesyl transferase heme a biosynthesis

YPL174C NIP100 XVI 222772 220166 component of the dynactin complex mitotic anaphase B

YPL183W-A XVI 199094 199375 protein biosynthesis

YPL215W CBP3 XVI 147415 148422 required for assembly of cytochrome bc1 complex protein complex assembly

YPL270W MDL2 XVI 30341 32803 ATP-binding cassette (ABC) transporter family member transport

YPR047W MSF1 XVI 657509 658933 phenylalanine--tRNA ligase alpha chain, mitochondrial protein biosynthesis

YPR067W ISA2 XVI 682215 682772 mitochondrial protein required for iron metabolism iron transport

YPR123C XVI 786570 786136 biological_process unknown

YPR124W CTR1 XVI 786203 787423 copper transport protein transport

YPR134W MSS18 XVI 798046 798852

YPR166C MRP2 XVI 876624 876277 ribosomal protein S14 protein biosynthesis

YPR191W QCR2 XVI 919376 920482 ubiquinol--cytochrome-c reductase 40KD chain II

The search for the ORFs you submitted has been completed.

ORF	Gene	Chromosome	Start Coord	Stop Coord	CYGD description	SGD description
YAL039C	CYC3	I	69527	68718	holocytochrome-c synthase (cytochrome c heme lyase)
YAL044C	GCV3	I	58485	57952	glycine decarboxylase, subunit H	glycine metabolism
YBL007C	SLA1	II	216327	212593	cytoskeleton assembly control protein	cell wall organization and biogenesis
YBL021C	HAP3	II	182056	181622	CCAAT-binding factor subunit	transcription
YBL038W	MRPL16	II	146149	146847	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis
YBL045C	COR1	II	135478	134105	ubiquinol--cytochrome-c reductase 44K core protein
YBL080C	PET112	II	74689	73064	required to maintain rho+ mitochondrial DNA
YBL090W	MRP21	II	48819	49352	Mitochondrial ribosomal protein	protein biosynthesis
YBL099W	ATP1	II	37045	38682	F1F0-ATPase complex, F1 alpha subunit	ATP synthesis coupled proton transport
YBL100C		II	37295	36981		biological_process unknown
YBR003W	COQ1	II	242770	244191	hexaprenyl pyrophosphate synthetase precursor	ubiquinone metabolism
YBR026C	(MRF1)	II	293978	292836	mitochondrial respiratory function protein	respiration
YBR035C	PDX3	II	306914	306228	pyridoxamine-phosphate oxidase
YBR037C	SCO1	II	311410	310523	involved in stabilization of COX1P and COX2P	protein complex assembly
YBR044C	TCM62	II	326019	324298	chaperone required for assembly of mitochondrial succinate dehydrogenase	protein complex assembly
YBR163W	DEM1	II	565681	567438	weak similarity to PTA1P (pre-tRNA processing protein)	biological_process unknown
YBR179C	FZO1	II	589072	586505	required for biogenesis of mitochondria	mitochondrion organization and biogenesis
YCR003W	MRPL32	III	118614	119165	ribosomal protein YmL32. mitochondrial	protein biosynthesis
YCR009C	RVS161	III	131536	130739	similarity to human amphiphysin and RVS167P	endocytosis
YCR028C-A	RIM1	III	173432	172942	ssDNA-binding protein, mitochondrial
YCR071C	IMG2	III	240535	240095	required for Integrity of Mitochondrial Genome
YDL032W		IV	393686	393997		biological_process unknown
YDL033C		IV	393908	392655
YDL044C	MTF2	IV	375285	373963	mitochondrial protein involved in mRNA splicing and protein synthesis	mRNA processing
YDL067C	COX9	IV	334395	334216	cytochrome-c oxidase chain VIIA
YDL068W		IV	333499	333828		biological_process unknown
YDL069C	CBS1	IV	333821	333120	translational activator of COB mRNA	protein biosynthesis
YDL104C	QRI7	IV	274875	273652		biological_process unknown
YDL198C	YHM1	IV	104552	103650	member of the mitochondrial carrier family (MCF)	transport
YDL202W	MRPL11	IV	98476	99225	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis
YDR079W	PET100	IV	603058	603393	cytochrome-c oxidase assembly protein	cytochrome c oxidase biogenesis
YDR114C		IV	682219	681917		biological_process unknown
YDR116C		IV	683574	682717		biological_process unknown
YDR148C	KGD2	IV	755059	753668	2-oxoglutarate dehydrogenase complex E2 component	tricarboxylic acid cycle
YDR197W	CBS2	IV	851220	852389	cytochrome B translational activator protein	protein biosynthesis
YDR204W	COQ4	IV	858129	859136		ubiquinone metabolism
YDR230W		IV	926214	926561		biological_process unknown
YDR231C	COX20	IV	926901	926284	in the maturation and assembly of cytochrome oxidase involved protein	respiration
YDR237W	MRPL7	IV	936606	937484		protein biosynthesis
YDR268W	MSW1	IV	1003995	1005134	tryptophanyl-tRNA synthetase, mitochondrial
YDR270W	CCC2	IV	1005666	1008680	probable copper-transporting ATPase
YDR337W	MRPS28	IV	1146309	1147169	ribosomal protein of the small subunit, mitochondrial	protein biosynthesis
YDR350C	TCM10	IV	1178163	1176328	hypothetical protein	biological_process unknown
YDR388W	RVS167	IV	1250175	1251623	reduced viability upon starvation protein	endocytosis
YDR462W	MRPL28	IV	1386062	1386505		protein biosynthesis
YDR477W	SNF1	IV	1412360	1414261	carbon catabolite derepressing ser/thr protein kinase	protein phosphorylation
YDR494W		IV	1436917	1437783		biological_process unknown
YDR507C	GIN4	IV	1465789	1462361	ser/thr protein kinase	protein phosphorylation
YDR509W		IV	1468229	1468576		biological_process unknown
YDR512C		IV	1471066	1470503		biological_process unknown
YDR518W	EUG1	IV	1478611	1480164	protein disulfide isomerase
YDR533C		IV	1502163	1501450		biological_process unknown
YEL024W	RIP1	V	107260	107907	ubiquinol--cytochrome-c reductase iron-sulfur protein precursor
YEL050C	RML2	V	60851	59670	ribosomal L2 protein, mitochondrial	protein biosynthesis
YER017C	AFG3	V	191787	189502	protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)	protein complex assembly
YER028C		V	211875	210691	similarity to MIG1P	biological_process unknown
YER050C	RSM18	V	254578	253970	component of the mitochondrial ribosomal small subunit
YER058W	PET117	V	271766	272089	cytochrome c oxidase assembly factor	cytochrome c oxidase biogenesis
YER061C	CEM1	V	279624	278296	beta-keto-acyl-ACP synthase, mitochondrial	hexadecanal biosynthesis
YER122C	GLO3	V	404348	402867	zinc finger protein	ER to Golgi transport
YER141W	COX15	V	453454	454914	cytochrome oxidase assembly factor	cytochrome c oxidase biogenesis
YER153C	PET122	V	474800	474036	translational activator of cytochrome c oxidase subunit III	protein biosynthesis
YFL016C	MDJ1	VI	106230	104695	heat shock protein - chaperone	protein folding
YFL018C	LPD1	VI	103121	101622	dihydrolipoamide dehydrogenase precursor	serine biosynthesis
YGL064C		VII	383206	381521	similarity to YLR276c and YKR024c	biological_process unknown
YGL071W	RCS1	VII	372010	374082	iron-regulated transcriptional repressor	iron transport
YGL095C	VPS45	VII	330605	328872	vacuolar protein sorting-associated protein	Golgi to vacuole transport
YGL107C		VII	306271	304331		biological_process unknown
YGL115W	SNF4	VII	292031	292999	nuclear regulatory protein
YGL129C	RSM23	VII	269192	267726	similarity to S.pombe hypothetical protein SPBC29A3.15C - putative mitochondrial function
YGL237C	HAP2	VII	53528	52731	CCAAT-binding factor subunit
YGR062C	COX18	VII	617272	616322	required for activity of mitochondrial cytochrome oxidase	cytochrome c oxidase biogenesis
YGR076C	MRPL25	VII	637571	637098		protein biosynthesis
YGR102C		VII	695129	694578		biological_process unknown
YGR112W	SHY1	VII	717352	718521	SURF homologue protein	respiration
YGR150C		VII	793048	790454		biological_process unknown
YGR165W		VII	829111	830148		biological_process unknown
YGR171C	MSM1	VII	842546	840819	methionyl-tRNA synthetase
YGR174C	CBP4	VII	846400	845888	ubiquinol--cytochrome-c reductase assembly factor	protein complex assembly
YGR183C	QCR9	VII	859471	859058	ubiquinol--cytochrome-c reductase subunit 9
YGR215W	RSM27	VII	922170	922502	strong similarity to hypothetical S. pombe protein
YGR220C	MRPL9	VII	936876	936067	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis
YGR222W	PET54	VII	939916	940797	splicing protein and translational activator, mitochondrial	protein biosynthesis
YGR255C	COQ6	VII	1003958	1002519	monooxygenase	ubiquinone metabolism
YHL005C		VIII	99214	98822		biological_process unknown
YHL038C	CBP2	VIII	25506	23614	apo-cytochrome b pre-mRNA processing protein 2
YHR008C	SOD2	VIII	123583	122882	superoxide dismutase (Mn) precursor, mitochondrial
YHR011W	DIA4	VIII	127772	129112	strong similarity to seryl-tRNA synthetases	pseudohyphal growth
YHR116W		VIII	341667	342122		biological_process unknown
YIL093C	RSM25	IX	188781	187987	weak similarity to S.pombe hypothetical protein SPBC16A3
YIL125W	KGD1	IX	122689	125733	2-oxoglutarate dehydrogenase complex E1 component	tricarboxylic acid cycle
YIL154C	(IMP2)	IX	55021	53981	sugar utilization regulatory protein	DNA repair
YIL157C		IX	47542	46949		biological_process unknown
YIR021W	MRS1	IX	397291	398382	involved in mitochondrial RNA splicing of COB mRNA	mRNA splicing
YJL003W		X	432336	432692		biological_process unknown
YJL022W		X	397805	398113		biological_process unknown
YJL023C	PET130	X	398094	397051		biological_process unknown
YJL046W		X	351956	353311	similarity to E.coli lipoate-protein ligase A	biological_process unknown
YJL096W	MRPL49	X	245998	246672	ribosomal protein YmL49. mitochondrial	protein biosynthesis
YJL102W	MEF2	X	230998	233457		protein synthesis elongation
YJL166W	QCR8	X	106426	106710	ubiquinol--cytochrome-c reductase chain VIII
YJL180C	ATP12	X	88558	87581	F1F0-ATPase complex assembly protein	protein complex assembly
YJL209W	CBP1	X	38005	39969	apo-cytochrome b pre-mRNA processing protein
YJR077C	MIR1	X	577882	576947	phosphate transport protein, mitochondrial (MCF)	phosphate transport
YJR113C	RSM7	X	638668	637925	similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7
YJR120W		X	646819	647169	hypothetical protein	biological_process unknown
YJR121W	ATP2	X	647300	648835	F1F0-ATPase complex, F1 beta subunit	ATP synthesis coupled proton transport
YJR144W	MGM101	X	700575	701384	mitochondrial genome maintenance protein	mitochondrial genome maintenance
YKL002W	DID4	XI	437416	438182	class E vacuolar-protein sorting and endocytosis factor	biological_process unknown
YKL016C	ATP7	XI	407627	407103	F1F0-ATPase complex, FO D subunit	ATP synthesis coupled proton transport
YKL055C	OAR1	XI	335799	334963	putative 3-oxoacyl-(acyl carrier protein) reductase	respiration
YKL087C	CYT2	XI	277505	276831	holocytochrome-c1 synthase
YKL109W	HAP4	XI	231870	233534	CCAAT-binding factor subunit	transcription
YKL138C	MRPL31	XI	185683	185288	ribosomal protein YmL31, mitochondrial	protein biosynthesis
YKL148C	SDH1	XI	171131	169209	succinate dehydrogenase flavoprotein precursor	tricarboxylic acid cycle
YKL155C	RSM22	XI	161344	159458	similarity to S. pombe SPAC1420.04c putative cytochrome c oxidase assembly protein
YKL167C	MRP49	XI	134136	133723	ribosomal protein, mitochondrial	protein biosynthesis
YKL208W	CBT1	XI	47158	47973	apo-cytochrome b pre-mRNA processing protein
YLL006W	MMM1	XII	136585	137865	required for mitochondrial shape and structure	mitochondrion inheritance
YLL009C	COX17	XII	131413	131204	interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly	cytochrome c oxidase biogenesis
YLL018C-A	COX19	XII	108971	108675	similarity to hypothetical S. pombe protein (YEB7)
YLL027W	ISA1	XII	87402	88154	similarity to H.influenzae and E.coli hypothetical proteins	iron transport
YLL033W		XII	73408	74100		biological_process unknown
YLL041C	SDH2	XII	53930	53130	succinate dehydrogenase iron-sulfur protein subunit	tricarboxylic acid cycle
YLR038C	COX12	XII	225173	224922	cytochrome-c oxidase, subunit VIB
YLR083C	EMP70	XII	296095	294092	endosomal protein
YLR091W		XII	322298	323179	hypothetical protein	biological_process unknown
YLR139C	SLS1	XII	423474	421543	suppresses lethality of SSM4 deletion
YLR201C		XII	550295	549513		biological_process unknown
YLR202C		XII	550638	550196		biological_process unknown
YLR203C	MSS51	XII	551962	550652	possibly involved in translational activation of COX1 and COB mRNA	protein biosynthesis
YLR204W	QRI5	XII	552272	552607	weak similarity to YOR309c	biological_process unknown
YLR239C	LIP2	XII	617318	616332		biological_process unknown
YLR304C	ACO1	XII	737548	735212	aconitate hydratase	tricarboxylic acid cycle
YLR368W		XII	857539	859335	weak similarity to Mus musculus F-box protein FBA	biological_process unknown
YLR393W	ATP10	XII	907078	907917	F1F0 ATPase complex assembly protein	protein complex assembly
YML061C	PIF1	XIII	151532	148953	DNA helicase involved in mitochondrial DNA repair and telomere length	DNA recombination
YML081C-A	ATP18	XIII	104162	103983	gene for subunit i/j of the mitochondrial F1F0-ATP synthase	ATP synthesis coupled proton transport
YML110C	COQ5	XIII	50954	50031	ubiquinone biosynthesis, methyltransferase	ubiquinone metabolism
YML120C	NDI1	XIII	29807	28266		complex I (NADH to ubiquinone)
YML129C	COX14	XIII	14754	14542	cytochrome-c oxidase assembly protein	respiration
YMR021C	MAC1	XIII	318417	317164	metal binding activator
YMR035W	IMP2	XIII	341141	341674	mitochondrial inner membrane protease subunit	mitochondrial processing
YMR063W	RIM9	XIII	397076	397795	regulator for sporulation and invasive growth
YMR064W	AEP1	XIII	397902	399458	nuclear control of ATPase messenger RNA expression protein	protein biosynthesis
YMR072W	ABF2	XIII	411568	412119	high mobility group protein	mitochondrial genome maintenance
YMR098C		XIII	462608	460770		biological_process unknown
YMR138W	CIN4	XIII	545154	545729	GTP-binding protein	microtubule-based process
YMR150C	IMP1	XIII	562527	561955	protease, mitochondrial	mitochondrial processing
YMR151W	YIM2	XIII	562505	562942		biological_process unknown
YMR158W		XIII	572247	572714		biological_process unknown
YMR257C	PET111	XIII	782030	779628	required for translation of COX2 mRNA	protein biosynthesis
YMR267W	PPA2	XIII	801771	802703	inorganic pyrophosphatase, mitochondrial	respiration
YMR285C	NGL2	XIII	841691	840144	similarity to CCR4P	biological_process unknown
YMR286W	MRPL33	XIII	841942	842202	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis
YMR287C	MSU1	XIII	845345	842436	3'-5' exonuclease for RNA 3' ss-tail, mitochondrial
YNL005C	MRP7	XIV	622425	621310	ribosomal protein YmL2 precursor, mitochondrial	protein biosynthesis
YNL052W	COX5A	XIV	531721	532182	cytochrome-c oxidase chain V.A precursor
YNL073W	MSK1	XIV	488383	490113
YNL170W		XIV	315975	316370		biological_process unknown
YNL177C		XIV	304612	303683	similarity to hypothetical protein S. pombe	biological_process unknown
YNL184C		XIV	292880	292554		biological_process unknown
YNL252C	MRPL17	XIV	172285	171440	ribosomal protein of the large subunit (YmL30), mitochondrial	protein biosynthesis
YNL315C	ATP11	XIV	44279	43323	F1F0-ATPase complex assembly protein	protein complex assembly
YNR020C		XIV	668219	667407	similarity to hypothetical metalloproteinase S. pombe	biological_process unknown
YNR036C		XIV	694819	694358		biological_process unknown
YNR037C	RSM19	XIV	695324	695049
YNR041C	COQ2	XIV	701656	700538	para-hydroxybenzoate--polyprenyltransferase	ubiquinone metabolism
YNR042W		XIV	701235	701663		biological_process unknown
YNR045W	PET494	XIV	706136	707605	translational activator, mitochondrial	protein biosynthesis
YOL008W		XV	310312	310935	similarity to hypothetical protein S. pombe	biological_process unknown
YOL009C	MDM12	XV	310139	309324	involved in mitochondrial inheritance	mitochondrion inheritance
YOL027C		XV	273724	272003	similarity to YPR125w	biological_process unknown
YOL071W		XV	196506	196994		biological_process unknown
YOL095C	HMI1	XV	141346	139226	mitochondrial DNA helicase	biological_process unknown
YOL096C	COQ3	XV	139056	138106	enzyme of ubiquinone (coenzyme Q) biosynthesis	ubiquinone metabolism
YOR065W	CYT1	XV	447440	448369		oxidative phosphorylation
YOR135C		XV	580499	580158		biological_process unknown
YOR136W	IDH2	XV	580249	581358	isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial	tricarboxylic acid cycle
YOR150W	MRPL23	XV	611998	612489		protein biosynthesis
YOR196C	LIP5	XV	716836	715592	lipoic acid synthase	fatty acid metabolism
YOR200W		XV	720416	720814		biological_process unknown
YOR201C	PET56	XV	721707	720469	rRNA (guanosine-2'-O-)-methyltransferase	ribosomal large subunit assembly and maintenance
YOR205C		XV	727233	725563	hypothetical protein	biological_process unknown
YOR211C	MGM1	XV	741631	738923	dynamin-like protein	mitochondrion organization and biogenesis
YOR221C	MCT1	XV	757830	756475	malonyl-CoA:ACP transferase	fatty acid metabolism
YOR241W	MET7	XV	786994	788640	tetrahydrofolylpolyglutamate synthase
YOR305W		XV	889015	889743		biological_process unknown
YOR330C	MIP1	XV	943455	939613	DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial	DNA dependent DNA replication
YOR332W	VMA4	XV	943648	944349	H+-ATPase V1 domain 27 KD subunit, vacuolar	vacuolar acidification
YOR333C		XV	944949	944533		biological_process unknown
YOR350C	MNE1	XV	994847	992856		biological_process unknown
YPL005W		XVI	548481	550301		biological_process unknown
YPL013C		XVI	529345	528980	strong similarity to N.crassa mitochondrial ribosomal protein S24	biological_process unknown
YPL029W	SUV3	XVI	495502	497715	ATP-dependent RNA helicase, mitochondrial
YPL040C	ISM1	XVI	478996	475988
YPL060W	LPE10	XVI	434518	435759	mitochondrial inner membrane protein	biological_process unknown
YPL078C	ATP4	XVI	408739	408005	F1F0-ATPase complex, F0 subunit B	ATP synthesis coupled proton transport
YPL097W	MSY1	XVI	364947	366425
YPL104W	MSD1	XVI	355695	357671	aspartate--tRNA ligase, mitochondrial	protein biosynthesis
YPL118W	MRP51	XVI	326627	327661	strong similarity to S.kluyveri hypothetical protein	protein biosynthesis
YPL132W	COX11	XVI	301715	302617	cytochrome-c oxidase assembly protein	respiration
YPL172C	COX10	XVI	225740	224352	farnesyl transferase	heme a biosynthesis
YPL174C	NIP100	XVI	222772	220166	component of the dynactin complex	mitotic anaphase B
YPL183W-A		XVI	199094	199375		protein biosynthesis
YPL215W	CBP3	XVI	147415	148422	required for assembly of cytochrome bc1 complex	protein complex assembly
YPL270W	MDL2	XVI	30341	32803	ATP-binding cassette (ABC) transporter family member	transport
YPR047W	MSF1	XVI	657509	658933	phenylalanine--tRNA ligase alpha chain, mitochondrial	protein biosynthesis
YPR067W	ISA2	XVI	682215	682772	mitochondrial protein required for iron metabolism	iron transport
YPR123C		XVI	786570	786136		biological_process unknown
YPR124W	CTR1	XVI	786203	787423	copper transport protein	transport
YPR134W	MSS18	XVI	798046	798852
YPR166C	MRP2	XVI	876624	876277	ribosomal protein S14	protein biosynthesis
YPR191W	QCR2	XVI	919376	920482	ubiquinol--cytochrome-c reductase 40KD chain II