Class III Final Mitochondrial Candidates in the Yeast Deletion and Mitochondria (YDPM) Database
The number of ORFs found in the set = 201
ORF Gene Chromosome Start Coord Stop Coord CYGD description SGD description
YAL010C MDM10 I 135663 134182 involved in mitochondrial morphology and inheritance mitochondrion inheritance
YAL039C CYC3 I 69527 68718 holocytochrome-c synthase (cytochrome c heme lyase)
YAL044C GCV3 I 58485 57952 glycine decarboxylase, subunit H glycine metabolism
YBL038W MRPL16 II 146149 146847 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YBL045C COR1 II 135478 134105 ubiquinol--cytochrome-c reductase 44K core protein
YBL080C PET112 II 74689 73064 required to maintain rho+ mitochondrial DNA
YBL090W MRP21 II 48819 49352 Mitochondrial ribosomal protein protein biosynthesis
YBL099W ATP1 II 37045 38682 F1F0-ATPase complex, F1 alpha subunit ATP synthesis coupled proton transport
YBR003W COQ1 II 242770 244191 hexaprenyl pyrophosphate synthetase precursor ubiquinone metabolism
YBR037C SCO1 II 311410 310523 involved in stabilization of COX1P and COX2P protein complex assembly
YBR044C TCM62 II 326019 324298 chaperone required for assembly of mitochondrial succinate dehydrogenase protein complex assembly
YBR084W MIS1 II 411012 413939 C1-tetrahydrofolate synthase precursor, mitochondrial amino acid metabolism
YBR179C FZO1 II 589072 586505 required for biogenesis of mitochondria mitochondrion organization and biogenesis
YBR185C MBA1 II 599917 599081 respiratory chain assembly protein respiration
YBR221C PDB1 II 666211 665111 pyruvate dehydrogenase (lipoamide) beta chain precursor
YBR251W MRPS5 II 721348 722271 ribosomal protein S5. mitochondrial protein biosynthesis
YBR268W MRPL37 II 741257 741574 ribosomal protein YmL37. mitochondrial protein biosynthesis
YBR282W MRPL27 II 768197 768637 ribosomal protein YmL27 precursor, mitochondrial protein biosynthesis
YCR003W MRPL32 III 118614 119165 ribosomal protein YmL32. mitochondrial protein biosynthesis
YCR024C III 162214 160736 asn-tRNA synthetase, mitochondrial protein biosynthesis
YCR028C-A RIM1 III 173432 172942 ssDNA-binding protein, mitochondrial
YCR071C IMG2 III 240535 240095 required for Integrity of Mitochondrial Genome
YDL006W PTC1 IV 439905 440750 protein serine/threonine phosphatase 2c tRNA splicing
YDL044C MTF2 IV 375285 373963 mitochondrial protein involved in mRNA splicing and protein synthesis mRNA processing
YDL067C COX9 IV 334395 334216 cytochrome-c oxidase chain VIIA
YDL069C CBS1 IV 333821 333120 translational activator of COB mRNA protein biosynthesis
YDL119C IV 247611 246688 biological_process unknown
YDL142C CRD1 IV 202571 201720 cardiolipin synthase lipid biosynthesis
YDL198C YHM1 IV 104552 103650 member of the mitochondrial carrier family (MCF) transport
YDL202W MRPL11 IV 98476 99225 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YDR079W PET100 IV 603058 603393 cytochrome-c oxidase assembly protein cytochrome c oxidase biogenesis
YDR120C TRM1 IV 693254 691542 N2.N2-dimethylguanine tRNA methyltransferase
YDR148C KGD2 IV 755059 753668 2-oxoglutarate dehydrogenase complex E2 component tricarboxylic acid cycle
YDR178W SDH4 IV 817943 818488 succinate dehydrogenase membrane anchor subunit for SDH2P tricarboxylic acid cycle
YDR194C MSS116 IV 847938 845944 RNA helicase of the DEAD box family, mitochondrial RNA splicing
YDR197W CBS2 IV 851220 852389 cytochrome B translational activator protein protein biosynthesis
YDR231C COX20 IV 926901 926284 in the maturation and assembly of cytochrome oxidase involved protein respiration
YDR237W MRPL7 IV 936606 937484 protein biosynthesis
YDR268W MSW1 IV 1003995 1005134 tryptophanyl-tRNA synthetase, mitochondrial
YDR298C ATP5 IV 1058805 1058167 F1F0-ATPase complex, OSCP subunit ATP synthesis coupled proton transport
YDR322W MRPL35 IV 1110581 1111684 protein biosynthesis
YDR337W MRPS28 IV 1146309 1147169 ribosomal protein of the small subunit, mitochondrial protein biosynthesis
YDR347W MRP1 IV 1169168 1170133 ribosomal protein of the small subunit, mitochondrial protein biosynthesis
YDR375C BCS1 IV 1226525 1225155 mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases respiration
YDR377W ATP17 IV 1228600 1228905 ATP synthase complex, subunit f ATP synthesis coupled proton transport
YDR405W MRP20 IV 1277635 1278426 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YDR456W NHX1 IV 1367474 1369375 NA+-H+ antiporter vacuolar acidification
YDR462W MRPL28 IV 1386062 1386505 protein biosynthesis
YDR529C QCR7 IV 1496551 1496168 ubiquinol--cytochrome-c reductase subunit 7
YEL024W RIP1 V 107260 107907 ubiquinol--cytochrome-c reductase iron-sulfur protein precursor
YEL050C RML2 V 60851 59670 ribosomal L2 protein, mitochondrial protein biosynthesis
YER014W HEM14 V 182599 184218 protoporphyrinogen oxidase, mitochondrial
YER017C AFG3 V 191787 189502 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) protein complex assembly
YER058W PET117 V 271766 272089 cytochrome c oxidase assembly factor cytochrome c oxidase biogenesis
YER061C CEM1 V 279624 278296 beta-keto-acyl-ACP synthase, mitochondrial hexadecanal biosynthesis
YER141W COX15 V 453454 454914 cytochrome oxidase assembly factor cytochrome c oxidase biogenesis
YER153C PET122 V 474800 474036 translational activator of cytochrome c oxidase subunit III protein biosynthesis
YER154W OXA1 V 475015 476223 cytochrome oxidase biogenesis protein mitochondrial translocation
YER178W PDA1 V 546743 548074 pyruvate dehydrogenase (lipoamide) alpha chain precursor
YFL016C MDJ1 VI 106230 104695 heat shock protein - chaperone protein folding
YFL018C LPD1 VI 103121 101622 dihydrolipoamide dehydrogenase precursor serine biosynthesis
YFL036W RPO41 VI 58781 62836 DNA-directed RNA polymerase, mitochondrial mitochondrial genome maintenance
YFR033C QCR6 VI 224756 224313 ubiquinol--cytochrome-c reductase 17K protein
YGL143C MRF1 VII 235961 234720 peptide chain release factor, mitochondrial protein biosynthesis
YGL236C MTO1 VII 55795 53756 strong similarity to gidA E.coli protein protein biosynthesis
YGR062C COX18 VII 617272 616322 required for activity of mitochondrial cytochrome oxidase cytochrome c oxidase biogenesis
YGR076C MRPL25 VII 637571 637098 protein biosynthesis
YGR084C MRP13 VII 648136 647117 ribosomal protein of the small subunit, mitochondrial protein biosynthesis
YGR112W SHY1 VII 717352 718521 SURF homologue protein respiration
YGR171C MSM1 VII 842546 840819 methionyl-tRNA synthetase
YGR174C CBP4 VII 846400 845888 ubiquinol--cytochrome-c reductase assembly factor protein complex assembly
YGR183C QCR9 VII 859471 859058 ubiquinol--cytochrome-c reductase subunit 9
YGR220C MRPL9 VII 936876 936067 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YGR222W PET54 VII 939916 940797 splicing protein and translational activator, mitochondrial protein biosynthesis
YGR255C COQ6 VII 1003958 1002519 monooxygenase ubiquinone metabolism
YGR257C VII 1007302 1006202 biological_process unknown
YHL038C CBP2 VIII 25506 23614 apo-cytochrome b pre-mRNA processing protein 2
YHR008C SOD2 VIII 123583 122882 superoxide dismutase (Mn) precursor, mitochondrial
YHR038W FIL1 VIII 184057 184749 Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C protein biosynthesis
YHR051W COX6 VIII 209697 210143 cytochrome-c oxidase subunit VI
YHR091C MSR1 VIII 286771 284840 arginyl-tRNA synthetase, mitochondrial
YHR120W MSH1 VIII 349576 352455 DNA mismatch repair protein, mitochondrial DNA repair
YHR147C MRPL6 VIII 393284 392640 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YIL070C MAM33 IX 231069 230269 mitochondrial acidic matrix protein respiration
YIL125W KGD1 IX 122689 125733 2-oxoglutarate dehydrogenase complex E1 component tricarboxylic acid cycle
YIR021W MRS1 IX 397291 398382 involved in mitochondrial RNA splicing of COB mRNA mRNA splicing
YJL023C PET130 X 398094 397051 biological_process unknown
YJL063C MRPL8 X 316171 315455 ribosomal protein L17. mitochondrial protein biosynthesis
YJL096W MRPL49 X 245998 246672 ribosomal protein YmL49. mitochondrial protein biosynthesis
YJL102W MEF2 X 230998 233457 protein synthesis elongation
YJL166W QCR8 X 106426 106710 ubiquinol--cytochrome-c reductase chain VIII
YJL180C ATP12 X 88558 87581 F1F0-ATPase complex assembly protein protein complex assembly
YJL209W CBP1 X 38005 39969 apo-cytochrome b pre-mRNA processing protein
YJR048W CYC1 X 526027 526356 cytochrome-c isoform 1 oxidative phosphorylation
YJR077C MIR1 X 577882 576947 phosphate transport protein, mitochondrial (MCF) phosphate transport
YJR113C RSM7 X 638668 637925 similarity to bacterial, chloroplast and mitochondrial ribosomal protein S7
YJR121W ATP2 X 647300 648835 F1F0-ATPase complex, F1 beta subunit ATP synthesis coupled proton transport
YJR144W MGM101 X 700575 701384 mitochondrial genome maintenance protein mitochondrial genome maintenance
YKL003C MRP17 XI 437130 436735 ribosomal protein of the small subunit, mitochondrial protein biosynthesis
YKL016C ATP7 XI 407627 407103 F1F0-ATPase complex, FO D subunit ATP synthesis coupled proton transport
YKL040C NFU1 XI 361468 360698 iron homeostasis iron homeostasis
YKL055C OAR1 XI 335799 334963 putative 3-oxoacyl-(acyl carrier protein) reductase respiration
YKL085W MDH1 XI 278765 279769 malate dehydrogenase precursor, mitochondrial tricarboxylic acid cycle
YKL087C CYT2 XI 277505 276831 holocytochrome-c1 synthase
YKL106W AAT1 XI 237179 238534 aspartate transaminase, mitochondrial aspartate catabolism
YKL134C 1-OCT XI 191440 189128 mitochondrial intermediate peptidase iron homeostasis
YKL138C MRPL31 XI 185683 185288 ribosomal protein YmL31, mitochondrial protein biosynthesis
YKL148C SDH1 XI 171131 169209 succinate dehydrogenase flavoprotein precursor tricarboxylic acid cycle
YKL167C MRP49 XI 134136 133723 ribosomal protein, mitochondrial protein biosynthesis
YKL170W MRPL38 XI 130636 131052 ribosomal protein of the large subunit (L14), mitochondrial protein biosynthesis
YKL208W CBT1 XI 47158 47973 apo-cytochrome b pre-mRNA processing protein
YKR085C MRPL20 XI 599317 598730 ribosomal protein YmL20, mitochondrial protein biosynthesis
YLL006W MMM1 XII 136585 137865 required for mitochondrial shape and structure mitochondrion inheritance
YLL009C COX17 XII 131413 131204 interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly cytochrome c oxidase biogenesis
YLL027W ISA1 XII 87402 88154 similarity to H.influenzae and E.coli hypothetical proteins iron transport
YLL041C SDH2 XII 53930 53130 succinate dehydrogenase iron-sulfur protein subunit tricarboxylic acid cycle
YLR038C COX12 XII 225173 224922 cytochrome-c oxidase, subunit VIB
YLR059C REX2 XII 260548 259739 putative 3'-5' exonuclease RNA processing
YLR067C PET309 XII 270711 267814 required for stability and translation of COX1 mRNA protein biosynthesis
YLR069C MEF1 XII 273916 271631 translation elongation factor G, mitochondrial protein synthesis elongation
YLR139C SLS1 XII 423474 421543 suppresses lethality of SSM4 deletion
YLR168C (MSF1) XII 500272 499580 probably involved in intramitochondrial protein sorting biological_process unknown
YLR203C MSS51 XII 551962 550652 possibly involved in translational activation of COX1 and COB mRNA protein biosynthesis
YLR239C LIP2 XII 617318 616332 biological_process unknown
YLR295C ATP14 XII 722373 721999 F1F0-ATPase complex, subunit h ATP synthesis coupled proton transport
YLR304C ACO1 XII 737548 735212 aconitate hydratase tricarboxylic acid cycle
YLR312W-A MRPL15 XII 759383 760241 protein biosynthesis
YLR369W SSQ1 XII 859551 861524 mitochondrial heat shock protein 70 DNA dependent DNA replication
YLR382C NAM2 XII 884751 882067 leucine--tRNA ligase precursor, mitochondrial
YLR393W ATP10 XII 907078 907917 F1F0 ATPase complex assembly protein protein complex assembly
YLR395C COX8 XII 909964 909728 cytochrome-c oxidase chain VIII
YLR439W MRPL4 XII 1014486 1015445 ribosomal protein, mitochondrial protein biosynthesis
YML009C MRPL39 XIII 251516 251304 protein biosynthesis
YML061C PIF1 XIII 151532 148953 DNA helicase involved in mitochondrial DNA repair and telomere length DNA recombination
YML081C-A ATP18 XIII 104162 103983 gene for subunit i/j of the mitochondrial F1F0-ATP synthase ATP synthesis coupled proton transport
YML110C COQ5 XIII 50954 50031 ubiquinone biosynthesis, methyltransferase ubiquinone metabolism
YML120C NDI1 XIII 29807 28266 complex I (NADH to ubiquinone)
YML129C COX14 XIII 14754 14542 cytochrome-c oxidase assembly protein respiration
YMR035W IMP2 XIII 341141 341674 mitochondrial inner membrane protease subunit mitochondrial processing
YMR064W AEP1 XIII 397902 399458 nuclear control of ATPase messenger RNA expression protein protein biosynthesis
YMR072W ABF2 XIII 411568 412119 high mobility group protein mitochondrial genome maintenance
YMR089C YTA12 XIII 448085 445608 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) protein complex assembly
YMR150C IMP1 XIII 562527 561955 protease, mitochondrial mitochondrial processing
YMR193W MRPL24 XIII 650035 650811 protein biosynthesis
YMR228W MTF1 XIII 724625 725650 RNA polymerase specific factor, mitochondrial transcription from mitochondrial promoter
YMR256C COX7 XIII 779126 778944 cytochrome-c oxidase, subunit VII
YMR257C PET111 XIII 782030 779628 required for translation of COX2 mRNA protein biosynthesis
YMR267W PPA2 XIII 801771 802703 inorganic pyrophosphatase, mitochondrial respiration
YMR282C AEP2 XIII 835098 833356 required for the expression of subunit-9 of atp synthase protein biosynthesis
YMR286W MRPL33 XIII 841942 842202 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YMR287C MSU1 XIII 845345 842436 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial
YNL003C PET8 XIV 625826 624972 similarity to mitochondrial rat tricarboxylate transport protein precursor biological_process unknown
YNL005C MRP7 XIV 622425 621310 ribosomal protein YmL2 precursor, mitochondrial protein biosynthesis
YNL052W COX5A XIV 531721 532182 cytochrome-c oxidase chain V.A precursor
YNL064C YDJ1 XIV 507093 505864 mitochondrial and ER import protein
YNL071W LAT1 XIV 491520 492968 dihydrolipoamide S-acetyltransferase
YNL073W MSK1 XIV 488383 490113
YNL252C MRPL17 XIV 172285 171440 ribosomal protein of the large subunit (YmL30), mitochondrial protein biosynthesis
YNL284C MRPL10 XIV 104100 103132 ribosomal protein of the large subunit, mitochondrial protein biosynthesis
YNL315C ATP11 XIV 44279 43323 F1F0-ATPase complex assembly protein protein complex assembly
YNR001C CIT1 XIV 631058 629619 citrate (si)-synthase, mitochondrial tricarboxylic acid cycle
YNR041C COQ2 XIV 701656 700538 para-hydroxybenzoate--polyprenyltransferase ubiquinone metabolism
YNR045W PET494 XIV 706136 707605 translational activator, mitochondrial protein biosynthesis
YOL009C MDM12 XV 310139 309324 involved in mitochondrial inheritance mitochondrion inheritance
YOL023W IFM1 XV 278056 280086 translation initiation factor 2. mitochondrial protein synthesis initiation
YOL033W MSE1 XV 263475 265085
YOL095C HMI1 XV 141346 139226 mitochondrial DNA helicase biological_process unknown
YOL096C COQ3 XV 139056 138106 enzyme of ubiquinone (coenzyme Q) biosynthesis ubiquinone metabolism
YOR017W PET127 XV 361411 363813 component of mitochondrial translation system RNA processing
YOR037W CYC2 XV 401440 402654 cytochrome-c mitochondrial import factor
YOR065W CYT1 XV 447440 448369 oxidative phosphorylation
YOR136W IDH2 XV 580249 581358 isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial tricarboxylic acid cycle
YOR150W MRPL23 XV 611998 612489 protein biosynthesis
YOR187W TUF1 XV 684029 685342
YOR196C LIP5 XV 716836 715592 lipoic acid synthase fatty acid metabolism
YOR201C PET56 XV 721707 720469 rRNA (guanosine-2'-O-)-methyltransferase ribosomal large subunit assembly and maintenance
YOR211C MGM1 XV 741631 738923 dynamin-like protein mitochondrion organization and biogenesis
YOR221C MCT1 XV 757830 756475 malonyl-CoA:ACP transferase fatty acid metabolism
YOR330C MIP1 XV 943455 939613 DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial DNA dependent DNA replication
YOR334W MRS2 XV 944588 946000 RNA splicing protein and member of the mitochondrial carrier family (MCF) mRNA splicing
YPL013C XVI 529345 528980 strong similarity to N.crassa mitochondrial ribosomal protein S24 biological_process unknown
YPL029W SUV3 XVI 495502 497715 ATP-dependent RNA helicase, mitochondrial
YPL040C ISM1 XVI 478996 475988
YPL060W LPE10 XVI 434518 435759 mitochondrial inner membrane protein biological_process unknown
YPL078C ATP4 XVI 408739 408005 F1F0-ATPase complex, F0 subunit B ATP synthesis coupled proton transport
YPL097W MSY1 XVI 364947 366425
YPL104W MSD1 XVI 355695 357671 aspartate--tRNA ligase, mitochondrial protein biosynthesis
YPL118W MRP51 XVI 326627 327661 strong similarity to S.kluyveri hypothetical protein protein biosynthesis
YPL132W COX11 XVI 301715 302617 cytochrome-c oxidase assembly protein respiration
YPL172C COX10 XVI 225740 224352 farnesyl transferase heme a biosynthesis
YPL173W MRPL40 XVI 223142 224035 ribosomal protein of the large subunit (YmL40), mitochondrial protein biosynthesis
YPL183W-A XVI 199094 199375 protein biosynthesis
YPL215W CBP3 XVI 147415 148422 required for assembly of cytochrome bc1 complex protein complex assembly
YPL262W FUM1 XVI 47336 48802 tricarboxylic acid cycle
YPL271W ATP15 XVI 30079 30267 F1F0-ATPase complex, F1 epsilon subunit ATP synthesis coupled proton transport
YPR047W MSF1 XVI 657509 658933 phenylalanine--tRNA ligase alpha chain, mitochondrial protein biosynthesis
YPR067W ISA2 XVI 682215 682772 mitochondrial protein required for iron metabolism iron transport
YPR133W-A TOM5 XVI 797552 797704 mitochondrial outer membrane protein mitochondrial translocation
YPR134W MSS18 XVI 798046 798852
YPR166C MRP2 XVI 876624 876277 ribosomal protein S14 protein biosynthesis
YPR191W QCR2 XVI 919376 920482 ubiquinol--cytochrome-c reductase 40KD chain II


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