Carbohydrate Utilization Defect Candidates in the Yeast Deletion and Mitochondria (YDPM) Database
The number of ORFs found in the set = 218

ORF Gene Chromosome Start Coord Stop Coord CYGD description SGD description carbohydrate utilization defect
YAL021C CCR4 I 113358 110845 transcriptional regulator yes

YBL002W HTB2 II 236454 236849 histone H2B.2 yes

YBL003C HTA2 II 235754 235356 histone H2A.2 yes

YBL022C PIM1 II 181237 177836 ATP-dependent protease, mitochondrial heat shock response yes

YBL030C PET9 II 163959 163003 ADP/ATP carrier protein (MCF) ATP/ADP exchange yes

YBL058W SHP1 II 111398 112669 potential regulatory subunit for GLC7P sporulation (sensu Saccharomyces) yes

YBL080C PET112 II 74689 73064 required to maintain rho+ mitochondrial DNA yes

YBL099W ATP1 II 37045 38682 F1F0-ATPase complex, F1 alpha subunit ATP synthesis coupled proton transport yes

YBR009C HHF1 II 255641 255330 yes

YBR010W HHT1 II 256288 256698 histone H3 yes

YBR037C SCO1 II 311410 310523 involved in stabilization of COX1P and COX2P protein complex assembly yes

YBR039W ATP3 II 315534 316469 F1F0-ATPase complex, F1 gamma subunit ATP synthesis coupled proton transport yes

YBR044C TCM62 II 326019 324298 chaperone required for assembly of mitochondrial succinate dehydrogenase protein complex assembly yes

YBR081C SPT7 II 405209 401211 involved in alteration of transcription start site selection yes

YBR126C TPS1 II 490350 488863 alpha,alpha-trehalose-phosphate synthase, 56 KD subunit stress response yes

YBR127C VMA2 II 492780 491227 H+-ATPase V1 domain 60 KD subunit, vacuolar vacuolar acidification yes

YBR143C SUP45 II 532140 530827 translational release factor protein synthesis termination yes

YBR146W MRPS9 II 535218 536054 ribosomal protein S9 precursor, mitochondrial protein biosynthesis yes

YBR179C FZO1 II 589072 586505 required for biogenesis of mitochondria mitochondrion organization and biogenesis yes

YBR185C MBA1 II 599917 599081 respiratory chain assembly protein respiration yes

YBR192W RIM2 II 607610 608743 mitochondrial carrier protein (MCF) transport yes

YBR196C PGI1 II 613858 612194 glucose-6-phosphate isomerase glycolysis yes

YCR003W MRPL32 III 118614 119165 ribosomal protein YmL32. mitochondrial protein biosynthesis yes

YCR009C RVS161 III 131536 130739 similarity to human amphiphysin and RVS167P endocytosis yes

YCR020C PET18 III 154653 154006 similarity to regulatory protein yes

YCR024C III 162214 160736 asn-tRNA synthetase, mitochondrial protein biosynthesis yes

YCR046C IMG1 III 210415 209906 ribosomal protein, mitochondrial protein biosynthesis yes

YCR071C IMG2 III 240535 240095 required for Integrity of Mitochondrial Genome yes

YDL004W ATP16 IV 443025 443507 F1F0-ATPase complex, F1 delta subunit ATP synthesis coupled proton transport yes

YDL005C MED2 IV 442305 441010 transcriptional regulation mediator transcription from Pol II promoter yes

YDL006W PTC1 IV 439905 440750 protein serine/threonine phosphatase 2c tRNA splicing yes

YDL045W-A MRP10 IV 372244 372531 mitochondrial ribosomal protein protein biosynthesis yes

YDL120W YFH1 IV 245922 246446 regulates mitochondrial iron accumulation yes

YDL194W SNF3 IV 111581 114235 high-affinity glucose transporter/regulatory protein transport yes

YDL202W MRPL11 IV 98476 99225 ribosomal protein of the large subunit, mitochondrial protein biosynthesis yes

YDR009W GAL3 IV 463430 464992 galactokinase transcription regulation yes

YDR028C REG1 IV 500874 497830 regulatory subunit for protein phosphatase GLC7P glycogen metabolism yes

YDR079W PET100 IV 603058 603393 cytochrome-c oxidase assembly protein cytochrome c oxidase biogenesis yes

YDR081C PDC2 IV 610075 607298 pyruvate decarboxylase regulatory protein vitamin B1 biosynthesis yes

YDR138W HPR1 IV 730571 732829 hyperrecombination protein related to TOP1P DNA recombination yes

YDR172W SUP35 IV 808317 810374 eukaryotic peptide chain release factor GTP-binding subunit protein synthesis termination yes

YDR178W SDH4 IV 817943 818488 succinate dehydrogenase membrane anchor subunit for SDH2P tricarboxylic acid cycle yes

YDR225W HTA1 IV 915521 915919 histone H2A yes

YDR226W ADK1 IV 916477 917145 adenylate kinase, cytosolic yes

YDR277C MTH1 IV 1015693 1014392 repressor of hexose transport genes hexose transport yes

YDR298C ATP5 IV 1058805 1058167 F1F0-ATPase complex, OSCP subunit ATP synthesis coupled proton transport yes

YDR322C-A TIM11 IV 1112285 1111995 subunit E of the dimeric form of mitochondrial F1F0-ATPase ATP synthesis coupled proton transport yes

YDR337W MRPS28 IV 1146309 1147169 ribosomal protein of the small subunit, mitochondrial protein biosynthesis yes

YDR342C HXT7 IV 1155918 1154206 high-affinity hexose transporter transport yes

YDR343C HXT6 IV 1161310 1159598 high-affinity hexose transporter transport yes

YDR345C HXT3 IV 1164650 1162947 low-affinity hexose transporter transport yes

YDR347W MRP1 IV 1169168 1170133 ribosomal protein of the small subunit, mitochondrial protein biosynthesis yes

YDR375C BCS1 IV 1226525 1225155 mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases respiration yes

YDR377W ATP17 IV 1228600 1228905 ATP synthase complex, subunit f ATP synthesis coupled proton transport yes

YDR405W MRP20 IV 1277635 1278426 ribosomal protein of the large subunit, mitochondrial protein biosynthesis yes

YDR456W NHX1 IV 1367474 1369375 NA+-H+ antiporter vacuolar acidification yes

YDR477W SNF1 IV 1412360 1414261 carbon catabolite derepressing ser/thr protein kinase protein phosphorylation yes

YDR529C QCR7 IV 1496551 1496168 ubiquinol--cytochrome-c reductase subunit 7 yes

YEL024W RIP1 V 107260 107907 ubiquinol--cytochrome-c reductase iron-sulfur protein precursor yes

YEL027W CUP5 V 100769 101251 H+-ATPase V0 domain 17 KD subunit, vacuolar endocytosis yes

YEL050C RML2 V 60851 59670 ribosomal L2 protein, mitochondrial protein biosynthesis yes

YEL059C-A SOM1 V 42624 42400 required for mitochondrial IMP1 peptidase function yes

YER003C PMI40 V 159117 157735 mannose-6-phosphate isomerase yes

YER014W HEM14 V 182599 184218 protoporphyrinogen oxidase, mitochondrial yes

YER015W FAA2 V 184540 186774 long-chain-fatty-acid--CoA ligase yes

YER017C AFG3 V 191787 189502 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) protein complex assembly yes

YER058W PET117 V 271766 272089 cytochrome c oxidase assembly factor cytochrome c oxidase biogenesis yes

YER065C ICL1 V 286912 285239 isocitrate lyase yes

YER133W GLC7 V 432491 433954 ser/thr phosphoprotein phosphatase 1, catalytic chain meiosis yes

YER141W COX15 V 453454 454914 cytochrome oxidase assembly factor cytochrome c oxidase biogenesis yes

YER153C PET122 V 474800 474036 translational activator of cytochrome c oxidase subunit III protein biosynthesis yes

YER154W OXA1 V 475015 476223 cytochrome oxidase biogenesis protein mitochondrial translocation yes

YER178W PDA1 V 546743 548074 pyruvate dehydrogenase (lipoamide) alpha chain precursor yes

YFL016C MDJ1 VI 106230 104695 heat shock protein - chaperone protein folding yes

YFR033C QCR6 VI 224756 224313 ubiquinol--cytochrome-c reductase 17K protein yes

YGL018C JAC1 VII 459660 459106 molecular chaperone aerobic respiration yes

YGL035C MIG1 VII 433058 431544 transcriptional repressor transcription regulation from Pol II promoter yes

YGL040C HEM2 VII 420552 419524 porphobilinogen synthase yes

YGL115W SNF4 VII 292031 292999 nuclear regulatory protein yes

YGL119W ABC1 VII 284443 285948 ubiquinol--cytochrome-c reductase complex assembly protein complex III (ubiquinone to cytochrome c) yes

YGL191W COX13 VII 144812 145201 cytochrome-c oxidase chain VIa yes

YGR062C COX18 VII 617272 616322 required for activity of mitochondrial cytochrome oxidase cytochrome c oxidase biogenesis yes

YGR082W TOM20 VII 644038 644589 mitochondrial outer membrane import receptor subunit, 20 kD mitochondrial translocation yes

YGR112W SHY1 VII 717352 718521 SURF homologue protein respiration yes

YGR174C CBP4 VII 846400 845888 ubiquinol--cytochrome-c reductase assembly factor protein complex assembly yes

YGR180C RNR4 VII 856296 855259 ribonucleotide reductase small subunit DNA replication yes

YGR183C QCR9 VII 859471 859058 ubiquinol--cytochrome-c reductase subunit 9 yes

YGR222W PET54 VII 939916 940797 splicing protein and translational activator, mitochondrial protein biosynthesis yes

YGR244C LSC2 VII 979315 978032 succinate-CoA ligase beta subunit tricarboxylic acid cycle yes

YHL038C CBP2 VIII 25506 23614 apo-cytochrome b pre-mRNA processing protein 2 yes

YHR038W FIL1 VIII 184057 184749 Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C protein biosynthesis yes

YHR047C AAP1' VIII 201301 198731 alanine/arginine aminopeptidase biological_process unknown yes

YHR120W MSH1 VIII 349576 352455 DNA mismatch repair protein, mitochondrial DNA repair yes

YHR147C MRPL6 VIII 393284 392640 ribosomal protein of the large subunit, mitochondrial protein biosynthesis yes

YHR193C EGD2 VIII 488232 487708 similarity to human alpha-NAC nascent polypeptide association yes

YIL033C BCY1 IX 291668 290418 cAMP dependent protein kinase, regulatory subunit stress response yes

YIL051C MMD1 IX 258279 257842 required for maintenance of mitochondrial DNA yes

YIL126W STH1 IX 117992 122071 subunit of the RSC complex meiosis yes

YIL162W SUC2 IX 37385 38983 invertase (sucrose hydrolyzing enzyme) sucrose catabolism yes

YIR021W MRS1 IX 397291 398382 involved in mitochondrial RNA splicing of COB mRNA mRNA splicing yes

YJL005W CYR1 X 424849 430929 adenylate cyclase meiosis yes

YJL023C PET130 X 398094 397051 biological_process unknown yes

YJL063C MRPL8 X 316171 315455 ribosomal protein L17. mitochondrial protein biosynthesis yes

YJL095W BCK1 X 246951 251387 ser/thr protein kinase of the MEKK family establishment of cell polarity (sensu Saccharomyces) yes

YJL208C NUC1 X 41183 40194 nuclease, mitochondrial DNA recombination yes

YJL209W CBP1 X 38005 39969 apo-cytochrome b pre-mRNA processing protein yes

YJR034W PET191 X 496375 496701 involved in assembly of cytochrome oxidase cytochrome c oxidase biogenesis yes

YJR040W GEF1 X 507438 509777 voltage-gated chloride channel protein transport yes

YJR122W CAF17 X 649469 650962 CCR4 associated factor yes

YKL011C CCE1 XI 420854 419793 cruciform-cutting endonuclease, mitochondrial tRNA processing yes

YKL032C IXR1 XI 381496 379703 intrastrand crosslink recognition protein and transcription factor yes

YKL055C OAR1 XI 335799 334963 putative 3-oxoacyl-(acyl carrier protein) reductase respiration yes

YKL085W MDH1 XI 278765 279769 malate dehydrogenase precursor, mitochondrial tricarboxylic acid cycle yes

YKL087C CYT2 XI 277505 276831 holocytochrome-c1 synthase yes

YKL093W MBR1 XI 264431 265450 required for optimal growth on glycerol yes

YKL109W HAP4 XI 231870 233534 CCAAT-binding factor subunit transcription yes

YKL134C 1-OCT XI 191440 189128 mitochondrial intermediate peptidase iron homeostasis yes

YKL148C SDH1 XI 171131 169209 succinate dehydrogenase flavoprotein precursor tricarboxylic acid cycle yes

YKL154W SRP102 XI 161603 162337 signal recognition particle receptor, beta chain yes

YKL167C MRP49 XI 134136 133723 ribosomal protein, mitochondrial protein biosynthesis yes

YKL192C ACP1 XI 80539 80162 mitochonrial acyl-carrier protein fatty acid biosynthesis yes

YKL208W CBT1 XI 47158 47973 apo-cytochrome b pre-mRNA processing protein yes

YKR031C SPO14 XI 506032 500981 phospholipase D yes

YLL006W MMM1 XII 136585 137865 required for mitochondrial shape and structure mitochondrion inheritance yes

YLL009C COX17 XII 131413 131204 interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly cytochrome c oxidase biogenesis yes

YLL041C SDH2 XII 53930 53130 succinate dehydrogenase iron-sulfur protein subunit tricarboxylic acid cycle yes

YLR025W SNF7 XII 194453 195175 class E Vps protein yes

YLR038C COX12 XII 225173 224922 cytochrome-c oxidase, subunit VIB yes

YLR067C PET309 XII 270711 267814 required for stability and translation of COX1 mRNA protein biosynthesis yes

YLR071C RGR1 XII 278627 275379 DNA-directed RNA polymerase II holoenzyme subunit transcription from Pol II promoter yes

YLR139C SLS1 XII 423474 421543 suppresses lethality of SSM4 deletion yes

YLR150W STM1 XII 440468 441289 biological_process unknown yes

YLR295C ATP14 XII 722373 721999 F1F0-ATPase complex, subunit h ATP synthesis coupled proton transport yes

YLR304C ACO1 XII 737548 735212 aconitate hydratase tricarboxylic acid cycle yes

YLR355C ILV5 XII 839252 838065 ketol-acid reducto-isomerase yes

YLR369W SSQ1 XII 859551 861524 mitochondrial heat shock protein 70 DNA dependent DNA replication yes

YLR377C FBP1 XII 874791 873745 fructos1.0e-1.6-bisphosphatase gluconeogenesis yes

YLR382C NAM2 XII 884751 882067 leucine--tRNA ligase precursor, mitochondrial yes

YLR399C BDF1 XII 921595 919535 sporulation protein sporulation (sensu Saccharomyces) yes

YLR439W MRPL4 XII 1014486 1015445 ribosomal protein, mitochondrial protein biosynthesis yes

YML048W GSF2 XIII 178426 179637 involved in glucose repression yes

YML078W CPR3 XIII 111002 111550 cyclophilin (peptidylprolyl isomerase), mitochondrial protein folding yes

YML081C-A ATP18 XIII 104162 103983 gene for subunit i/j of the mitochondrial F1F0-ATP synthase ATP synthesis coupled proton transport yes

YML091C RPM2 XIII 90731 87123 ribonuclease P precursor, mitochondrial yes

YML105C SEC65 XIII 58687 57866 signal recognition particle subunit SRP-dependent, co-translational membrane targeting, signal sequence recognition yes

YML110C COQ5 XIII 50954 50031 ubiquinone biosynthesis, methyltransferase ubiquinone metabolism yes

YML129C COX14 XIII 14754 14542 cytochrome-c oxidase assembly protein respiration yes

YMR021C MAC1 XIII 318417 317164 metal binding activator yes

YMR060C TOM37 XIII 392514 391531 mitochondrial outer membrane import receptor subunit, 37 kD mitochondrial translocation yes

YMR072W ABF2 XIII 411568 412119 high mobility group protein mitochondrial genome maintenance yes

YMR089C YTA12 XIII 448085 445608 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) protein complex assembly yes

YMR145C XIII 556474 554792 mitochondrial cytosolically directed NADH dehydrogenase biological_process unknown yes

YMR152W YIM1 XIII 563095 564192 mitochondrial processing yes

YMR165C SMP2 XIII 592627 590039 involved in plasmid maintenance, respiration and cell proliferation yes

YMR228W MTF1 XIII 724625 725650 RNA polymerase specific factor, mitochondrial transcription from mitochondrial promoter yes

YMR241W YHM2 XIII 751960 752904 yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2) biological_process unknown yes

YMR256C COX7 XIII 779126 778944 cytochrome-c oxidase, subunit VII yes

YMR257C PET111 XIII 782030 779628 required for translation of COX2 mRNA protein biosynthesis yes

YMR280C CAT8 XIII 831329 827028 transcription factor involved in gluconeogenesis gluconeogenesis yes

YMR282C AEP2 XIII 835098 833356 required for the expression of subunit-9 of atp synthase protein biosynthesis yes

YMR287C MSU1 XIII 845345 842436 3'-5' exonuclease for RNA 3' ss-tail, mitochondrial yes

YMR301C ATM1 XIII 869627 867555 ATP-binding cassette transporter protein, mitochondrial iron homeostasis yes

YNL003C PET8 XIV 625826 624972 similarity to mitochondrial rat tricarboxylate transport protein precursor biological_process unknown yes

YNL005C MRP7 XIV 622425 621310 ribosomal protein YmL2 precursor, mitochondrial protein biosynthesis yes

YNL025C SSN8 XIV 585287 584316 DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog repression of transcription from Pol II promoter yes

YNL037C IDH1 XIV 558998 557916 isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial tricarboxylic acid cycle yes

YNL055C POR1 XIV 518841 517990 mitochondrial outer membrane porin transport yes

YNL098C RAS2 XIV 440567 439599 GTP-binding protein pseudohyphal growth yes

YNL137C NAM9 XIV 370052 368592 ribosomal protein, mitochondrial protein biosynthesis yes

YNL201C XIV 263200 260624 eak similarity to pleiotropic drug resistance control protein PDR6 biological_process unknown yes

YNR001C CIT1 XIV 631058 629619 citrate (si)-synthase, mitochondrial tricarboxylic acid cycle yes

YNR023W SNF12 XIV 670415 672115 component of SWI/SNF global transcription activator complex chromatin modeling yes

YNR045W PET494 XIV 706136 707605 translational activator, mitochondrial protein biosynthesis yes

YNR052C POP2 XIV 720644 719343 required for glucose derepression yes

YOL001W PHO80 XV 325249 326130 cyclin cell cycle yes

YOL025W LAG2 XV 274957 276939 involved in determining longevity yes

YOL096C COQ3 XV 139056 138106 enzyme of ubiquinone (coenzyme Q) biosynthesis ubiquinone metabolism yes

YOL109W ZEO1 XV 110296 110637 weak similarity to G.hirsutum embryonic abundant protein D-7 yes

YOL147C PEX11 XV 48641 47931 peroxisomal membrane protein - peroxin peroxisome organization and biogenesis yes

YOL148C SPT20 XV 47572 45758 member of the TBP class of SPT proteins that alter transcription site selection yes

YOR017W PET127 XV 361411 363813 component of mitochondrial translation system RNA processing yes

YOR125C CAT5 XV 559847 559029 involved in coenzyme Q (ubiquinone) biosynthesis ubiquinone metabolism yes

YOR136W IDH2 XV 580249 581358 isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial tricarboxylic acid cycle yes

YOR158W PET123 XV 632163 633119 ribosomal protein, mitochondrial protein biosynthesis yes

YOR178C GAC1 XV 670240 667859 ser/thr phosphoprotein phosphatase 1, regulatory chain meiosis yes

YOR196C LIP5 XV 716836 715592 lipoic acid synthase fatty acid metabolism yes

YOR201C PET56 XV 721707 720469 rRNA (guanosine-2'-O-)-methyltransferase ribosomal large subunit assembly and maintenance yes

YOR221C MCT1 XV 757830 756475 malonyl-CoA:ACP transferase fatty acid metabolism yes

YOR231W MKK1 XV 772600 774126 ser/thr protein kinase protein phosphorylation yes

YOR278W HEM4 XV 842813 843640 uroporphyrinogen III synthase yes

YOR330C MIP1 XV 943455 939613 DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial DNA dependent DNA replication yes

YOR332W VMA4 XV 943648 944349 H+-ATPase V1 domain 27 KD subunit, vacuolar vacuolar acidification yes

YOR334W MRS2 XV 944588 946000 RNA splicing protein and member of the mitochondrial carrier family (MCF) mRNA splicing yes

YOR355W GDS1 XV 1005130 1006698 NAM9-1 suppressor yes

YOR358W HAP5 XV 1010154 1010882 CCAAT-binding factor subunit respiration yes

YPL002C SNF8 XVI 554323 553622 involved in glucose derepression yes

YPL029W SUV3 XVI 495502 497715 ATP-dependent RNA helicase, mitochondrial yes

YPL031C PHO85 XVI 493033 492014 cyclin-dependent protein kinase protein phosphorylation yes

YPL040C ISM1 XVI 478996 475988 yes

YPL042C SSN3 XVI 474702 473035 cyclin-dependent CTD kinase protein phosphorylation yes

YPL078C ATP4 XVI 408739 408005 F1F0-ATPase complex, F0 subunit B ATP synthesis coupled proton transport yes

YPL097W MSY1 XVI 364947 366425 yes

YPL104W MSD1 XVI 355695 357671 aspartate--tRNA ligase, mitochondrial protein biosynthesis yes

YPL118W MRP51 XVI 326627 327661 strong similarity to S.kluyveri hypothetical protein protein biosynthesis yes

YPL140C MKK2 XVI 289033 287513 protein kinase of the map kinase kinase (MEK) family protein phosphorylation yes

YPL148C PPT2 XVI 272826 272293 phosphopantetheine protein transferase lipid transport yes

YPL179W PPQ1 XVI 208156 209805 phosphoprotein phosphatase translational regulation yes

YPL254W HFI1 XVI 69485 70951 transcriptional coactivator transcription yes

YPL268W PLC1 XVI 35236 37845 1-phosphatidylinositol-4.5-bisphosphate phosphodiesterase pseudohyphal growth yes

YPL271W ATP15 XVI 30079 30267 F1F0-ATPase complex, F1 epsilon subunit ATP synthesis coupled proton transport yes

YPR024W YME1 XVI 610476 612719 protease of the SEC18/CDC48/PAS1 family of ATPases (AAA) mitochondrion organization and biogenesis yes

YPR026W ATH1 XVI 615374 619009 acid trehalase, vacuolar stress response yes

YPR051W MAK3 XVI 664955 665485 N-acetyltransferase yes

YPR133W-A TOM5 XVI 797552 797704 mitochondrial outer membrane protein mitochondrial translocation yes

YPR160W GPH1 XVI 861301 864009 glycogen phosphorylase yes

YPR166C MRP2 XVI 876624 876277 ribosomal protein S14 protein biosynthesis yes

YPR191W QCR2 XVI 919376 920482 ubiquinol--cytochrome-c reductase 40KD chain II yes

YPR198W SGE1 XVI 934029 935660 drug resistance protein yes

The search for the ORFs you submitted has been completed.

ORF	Gene	Chromosome	Start Coord	Stop Coord	CYGD description	SGD description	carbohydrate utilization defect
YAL021C	CCR4	I	113358	110845	transcriptional regulator		yes
YBL002W	HTB2	II	236454	236849	histone H2B.2		yes
YBL003C	HTA2	II	235754	235356	histone H2A.2		yes
YBL022C	PIM1	II	181237	177836	ATP-dependent protease, mitochondrial	heat shock response	yes
YBL030C	PET9	II	163959	163003	ADP/ATP carrier protein (MCF)	ATP/ADP exchange	yes
YBL058W	SHP1	II	111398	112669	potential regulatory subunit for GLC7P	sporulation (sensu Saccharomyces)	yes
YBL080C	PET112	II	74689	73064	required to maintain rho+ mitochondrial DNA		yes
YBL099W	ATP1	II	37045	38682	F1F0-ATPase complex, F1 alpha subunit	ATP synthesis coupled proton transport	yes
YBR009C	HHF1	II	255641	255330			yes
YBR010W	HHT1	II	256288	256698	histone H3		yes
YBR037C	SCO1	II	311410	310523	involved in stabilization of COX1P and COX2P	protein complex assembly	yes
YBR039W	ATP3	II	315534	316469	F1F0-ATPase complex, F1 gamma subunit	ATP synthesis coupled proton transport	yes
YBR044C	TCM62	II	326019	324298	chaperone required for assembly of mitochondrial succinate dehydrogenase	protein complex assembly	yes
YBR081C	SPT7	II	405209	401211	involved in alteration of transcription start site selection		yes
YBR126C	TPS1	II	490350	488863	alpha,alpha-trehalose-phosphate synthase, 56 KD subunit	stress response	yes
YBR127C	VMA2	II	492780	491227	H+-ATPase V1 domain 60 KD subunit, vacuolar	vacuolar acidification	yes
YBR143C	SUP45	II	532140	530827	translational release factor	protein synthesis termination	yes
YBR146W	MRPS9	II	535218	536054	ribosomal protein S9 precursor, mitochondrial	protein biosynthesis	yes
YBR179C	FZO1	II	589072	586505	required for biogenesis of mitochondria	mitochondrion organization and biogenesis	yes
YBR185C	MBA1	II	599917	599081	respiratory chain assembly protein	respiration	yes
YBR192W	RIM2	II	607610	608743	mitochondrial carrier protein (MCF)	transport	yes
YBR196C	PGI1	II	613858	612194	glucose-6-phosphate isomerase	glycolysis	yes
YCR003W	MRPL32	III	118614	119165	ribosomal protein YmL32. mitochondrial	protein biosynthesis	yes
YCR009C	RVS161	III	131536	130739	similarity to human amphiphysin and RVS167P	endocytosis	yes
YCR020C	PET18	III	154653	154006	similarity to regulatory protein		yes
YCR024C		III	162214	160736	asn-tRNA synthetase, mitochondrial	protein biosynthesis	yes
YCR046C	IMG1	III	210415	209906	ribosomal protein, mitochondrial	protein biosynthesis	yes
YCR071C	IMG2	III	240535	240095	required for Integrity of Mitochondrial Genome		yes
YDL004W	ATP16	IV	443025	443507	F1F0-ATPase complex, F1 delta subunit	ATP synthesis coupled proton transport	yes
YDL005C	MED2	IV	442305	441010	transcriptional regulation mediator	transcription from Pol II promoter	yes
YDL006W	PTC1	IV	439905	440750	protein serine/threonine phosphatase 2c	tRNA splicing	yes
YDL045W-A	MRP10	IV	372244	372531	mitochondrial ribosomal protein	protein biosynthesis	yes
YDL120W	YFH1	IV	245922	246446	regulates mitochondrial iron accumulation		yes
YDL194W	SNF3	IV	111581	114235	high-affinity glucose transporter/regulatory protein	transport	yes
YDL202W	MRPL11	IV	98476	99225	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis	yes
YDR009W	GAL3	IV	463430	464992	galactokinase	transcription regulation	yes
YDR028C	REG1	IV	500874	497830	regulatory subunit for protein phosphatase GLC7P	glycogen metabolism	yes
YDR079W	PET100	IV	603058	603393	cytochrome-c oxidase assembly protein	cytochrome c oxidase biogenesis	yes
YDR081C	PDC2	IV	610075	607298	pyruvate decarboxylase regulatory protein	vitamin B1 biosynthesis	yes
YDR138W	HPR1	IV	730571	732829	hyperrecombination protein related to TOP1P	DNA recombination	yes
YDR172W	SUP35	IV	808317	810374	eukaryotic peptide chain release factor GTP-binding subunit	protein synthesis termination	yes
YDR178W	SDH4	IV	817943	818488	succinate dehydrogenase membrane anchor subunit for SDH2P	tricarboxylic acid cycle	yes
YDR225W	HTA1	IV	915521	915919	histone H2A		yes
YDR226W	ADK1	IV	916477	917145	adenylate kinase, cytosolic		yes
YDR277C	MTH1	IV	1015693	1014392	repressor of hexose transport genes	hexose transport	yes
YDR298C	ATP5	IV	1058805	1058167	F1F0-ATPase complex, OSCP subunit	ATP synthesis coupled proton transport	yes
YDR322C-A	TIM11	IV	1112285	1111995	subunit E of the dimeric form of mitochondrial F1F0-ATPase	ATP synthesis coupled proton transport	yes
YDR337W	MRPS28	IV	1146309	1147169	ribosomal protein of the small subunit, mitochondrial	protein biosynthesis	yes
YDR342C	HXT7	IV	1155918	1154206	high-affinity hexose transporter	transport	yes
YDR343C	HXT6	IV	1161310	1159598	high-affinity hexose transporter	transport	yes
YDR345C	HXT3	IV	1164650	1162947	low-affinity hexose transporter	transport	yes
YDR347W	MRP1	IV	1169168	1170133	ribosomal protein of the small subunit, mitochondrial	protein biosynthesis	yes
YDR375C	BCS1	IV	1226525	1225155	mitochondrial protein of the CDC48/PAS1/SEC18 (AAA) family of ATPases	respiration	yes
YDR377W	ATP17	IV	1228600	1228905	ATP synthase complex, subunit f	ATP synthesis coupled proton transport	yes
YDR405W	MRP20	IV	1277635	1278426	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis	yes
YDR456W	NHX1	IV	1367474	1369375	NA+-H+ antiporter	vacuolar acidification	yes
YDR477W	SNF1	IV	1412360	1414261	carbon catabolite derepressing ser/thr protein kinase	protein phosphorylation	yes
YDR529C	QCR7	IV	1496551	1496168	ubiquinol--cytochrome-c reductase subunit 7		yes
YEL024W	RIP1	V	107260	107907	ubiquinol--cytochrome-c reductase iron-sulfur protein precursor		yes
YEL027W	CUP5	V	100769	101251	H+-ATPase V0 domain 17 KD subunit, vacuolar	endocytosis	yes
YEL050C	RML2	V	60851	59670	ribosomal L2 protein, mitochondrial	protein biosynthesis	yes
YEL059C-A	SOM1	V	42624	42400	required for mitochondrial IMP1 peptidase function		yes
YER003C	PMI40	V	159117	157735	mannose-6-phosphate isomerase		yes
YER014W	HEM14	V	182599	184218	protoporphyrinogen oxidase, mitochondrial		yes
YER015W	FAA2	V	184540	186774	long-chain-fatty-acid--CoA ligase		yes
YER017C	AFG3	V	191787	189502	protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)	protein complex assembly	yes
YER058W	PET117	V	271766	272089	cytochrome c oxidase assembly factor	cytochrome c oxidase biogenesis	yes
YER065C	ICL1	V	286912	285239	isocitrate lyase		yes
YER133W	GLC7	V	432491	433954	ser/thr phosphoprotein phosphatase 1, catalytic chain	meiosis	yes
YER141W	COX15	V	453454	454914	cytochrome oxidase assembly factor	cytochrome c oxidase biogenesis	yes
YER153C	PET122	V	474800	474036	translational activator of cytochrome c oxidase subunit III	protein biosynthesis	yes
YER154W	OXA1	V	475015	476223	cytochrome oxidase biogenesis protein	mitochondrial translocation	yes
YER178W	PDA1	V	546743	548074	pyruvate dehydrogenase (lipoamide) alpha chain precursor		yes
YFL016C	MDJ1	VI	106230	104695	heat shock protein - chaperone	protein folding	yes
YFR033C	QCR6	VI	224756	224313	ubiquinol--cytochrome-c reductase 17K protein		yes
YGL018C	JAC1	VII	459660	459106	molecular chaperone	aerobic respiration	yes
YGL035C	MIG1	VII	433058	431544	transcriptional repressor	transcription regulation from Pol II promoter	yes
YGL040C	HEM2	VII	420552	419524	porphobilinogen synthase		yes
YGL115W	SNF4	VII	292031	292999	nuclear regulatory protein		yes
YGL119W	ABC1	VII	284443	285948	ubiquinol--cytochrome-c reductase complex assembly protein	complex III (ubiquinone to cytochrome c)	yes
YGL191W	COX13	VII	144812	145201	cytochrome-c oxidase chain VIa		yes
YGR062C	COX18	VII	617272	616322	required for activity of mitochondrial cytochrome oxidase	cytochrome c oxidase biogenesis	yes
YGR082W	TOM20	VII	644038	644589	mitochondrial outer membrane import receptor subunit, 20 kD	mitochondrial translocation	yes
YGR112W	SHY1	VII	717352	718521	SURF homologue protein	respiration	yes
YGR174C	CBP4	VII	846400	845888	ubiquinol--cytochrome-c reductase assembly factor	protein complex assembly	yes
YGR180C	RNR4	VII	856296	855259	ribonucleotide reductase small subunit	DNA replication	yes
YGR183C	QCR9	VII	859471	859058	ubiquinol--cytochrome-c reductase subunit 9		yes
YGR222W	PET54	VII	939916	940797	splicing protein and translational activator, mitochondrial	protein biosynthesis	yes
YGR244C	LSC2	VII	979315	978032	succinate-CoA ligase beta subunit	tricarboxylic acid cycle	yes
YHL038C	CBP2	VIII	25506	23614	apo-cytochrome b pre-mRNA processing protein 2		yes
YHR038W	FIL1	VIII	184057	184749	Killed in Mutagen, sensitive to Diepoxybutane and/or Mitomycin C	protein biosynthesis	yes
YHR047C	AAP1'	VIII	201301	198731	alanine/arginine aminopeptidase	biological_process unknown	yes
YHR120W	MSH1	VIII	349576	352455	DNA mismatch repair protein, mitochondrial	DNA repair	yes
YHR147C	MRPL6	VIII	393284	392640	ribosomal protein of the large subunit, mitochondrial	protein biosynthesis	yes
YHR193C	EGD2	VIII	488232	487708	similarity to human alpha-NAC	nascent polypeptide association	yes
YIL033C	BCY1	IX	291668	290418	cAMP dependent protein kinase, regulatory subunit	stress response	yes
YIL051C	MMD1	IX	258279	257842	required for maintenance of mitochondrial DNA		yes
YIL126W	STH1	IX	117992	122071	subunit of the RSC complex	meiosis	yes
YIL162W	SUC2	IX	37385	38983	invertase (sucrose hydrolyzing enzyme)	sucrose catabolism	yes
YIR021W	MRS1	IX	397291	398382	involved in mitochondrial RNA splicing of COB mRNA	mRNA splicing	yes
YJL005W	CYR1	X	424849	430929	adenylate cyclase	meiosis	yes
YJL023C	PET130	X	398094	397051		biological_process unknown	yes
YJL063C	MRPL8	X	316171	315455	ribosomal protein L17. mitochondrial	protein biosynthesis	yes
YJL095W	BCK1	X	246951	251387	ser/thr protein kinase of the MEKK family	establishment of cell polarity (sensu Saccharomyces)	yes
YJL208C	NUC1	X	41183	40194	nuclease, mitochondrial	DNA recombination	yes
YJL209W	CBP1	X	38005	39969	apo-cytochrome b pre-mRNA processing protein		yes
YJR034W	PET191	X	496375	496701	involved in assembly of cytochrome oxidase	cytochrome c oxidase biogenesis	yes
YJR040W	GEF1	X	507438	509777	voltage-gated chloride channel protein	transport	yes
YJR122W	CAF17	X	649469	650962	CCR4 associated factor		yes
YKL011C	CCE1	XI	420854	419793	cruciform-cutting endonuclease, mitochondrial	tRNA processing	yes
YKL032C	IXR1	XI	381496	379703	intrastrand crosslink recognition protein and transcription factor		yes
YKL055C	OAR1	XI	335799	334963	putative 3-oxoacyl-(acyl carrier protein) reductase	respiration	yes
YKL085W	MDH1	XI	278765	279769	malate dehydrogenase precursor, mitochondrial	tricarboxylic acid cycle	yes
YKL087C	CYT2	XI	277505	276831	holocytochrome-c1 synthase		yes
YKL093W	MBR1	XI	264431	265450	required for optimal growth on glycerol		yes
YKL109W	HAP4	XI	231870	233534	CCAAT-binding factor subunit	transcription	yes
YKL134C	1-OCT	XI	191440	189128	mitochondrial intermediate peptidase	iron homeostasis	yes
YKL148C	SDH1	XI	171131	169209	succinate dehydrogenase flavoprotein precursor	tricarboxylic acid cycle	yes
YKL154W	SRP102	XI	161603	162337	signal recognition particle receptor, beta chain		yes
YKL167C	MRP49	XI	134136	133723	ribosomal protein, mitochondrial	protein biosynthesis	yes
YKL192C	ACP1	XI	80539	80162	mitochonrial acyl-carrier protein	fatty acid biosynthesis	yes
YKL208W	CBT1	XI	47158	47973	apo-cytochrome b pre-mRNA processing protein		yes
YKR031C	SPO14	XI	506032	500981	phospholipase D		yes
YLL006W	MMM1	XII	136585	137865	required for mitochondrial shape and structure	mitochondrion inheritance	yes
YLL009C	COX17	XII	131413	131204	interacts genetically with SCO1 and SCO2 in cytochrome oxidase assembly	cytochrome c oxidase biogenesis	yes
YLL041C	SDH2	XII	53930	53130	succinate dehydrogenase iron-sulfur protein subunit	tricarboxylic acid cycle	yes
YLR025W	SNF7	XII	194453	195175	class E Vps protein		yes
YLR038C	COX12	XII	225173	224922	cytochrome-c oxidase, subunit VIB		yes
YLR067C	PET309	XII	270711	267814	required for stability and translation of COX1 mRNA	protein biosynthesis	yes
YLR071C	RGR1	XII	278627	275379	DNA-directed RNA polymerase II holoenzyme subunit	transcription from Pol II promoter	yes
YLR139C	SLS1	XII	423474	421543	suppresses lethality of SSM4 deletion		yes
YLR150W	STM1	XII	440468	441289		biological_process unknown	yes
YLR295C	ATP14	XII	722373	721999	F1F0-ATPase complex, subunit h	ATP synthesis coupled proton transport	yes
YLR304C	ACO1	XII	737548	735212	aconitate hydratase	tricarboxylic acid cycle	yes
YLR355C	ILV5	XII	839252	838065	ketol-acid reducto-isomerase		yes
YLR369W	SSQ1	XII	859551	861524	mitochondrial heat shock protein 70	DNA dependent DNA replication	yes
YLR377C	FBP1	XII	874791	873745	fructos1.0e-1.6-bisphosphatase	gluconeogenesis	yes
YLR382C	NAM2	XII	884751	882067	leucine--tRNA ligase precursor, mitochondrial		yes
YLR399C	BDF1	XII	921595	919535	sporulation protein	sporulation (sensu Saccharomyces)	yes
YLR439W	MRPL4	XII	1014486	1015445	ribosomal protein, mitochondrial	protein biosynthesis	yes
YML048W	GSF2	XIII	178426	179637	involved in glucose repression		yes
YML078W	CPR3	XIII	111002	111550	cyclophilin (peptidylprolyl isomerase), mitochondrial	protein folding	yes
YML081C-A	ATP18	XIII	104162	103983	gene for subunit i/j of the mitochondrial F1F0-ATP synthase	ATP synthesis coupled proton transport	yes
YML091C	RPM2	XIII	90731	87123	ribonuclease P precursor, mitochondrial		yes
YML105C	SEC65	XIII	58687	57866	signal recognition particle subunit	SRP-dependent, co-translational membrane targeting, signal sequence recognition	yes
YML110C	COQ5	XIII	50954	50031	ubiquinone biosynthesis, methyltransferase	ubiquinone metabolism	yes
YML129C	COX14	XIII	14754	14542	cytochrome-c oxidase assembly protein	respiration	yes
YMR021C	MAC1	XIII	318417	317164	metal binding activator		yes
YMR060C	TOM37	XIII	392514	391531	mitochondrial outer membrane import receptor subunit, 37 kD	mitochondrial translocation	yes
YMR072W	ABF2	XIII	411568	412119	high mobility group protein	mitochondrial genome maintenance	yes
YMR089C	YTA12	XIII	448085	445608	protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)	protein complex assembly	yes
YMR145C		XIII	556474	554792	mitochondrial cytosolically directed NADH dehydrogenase	biological_process unknown	yes
YMR152W	YIM1	XIII	563095	564192		mitochondrial processing	yes
YMR165C	SMP2	XIII	592627	590039	involved in plasmid maintenance, respiration and cell proliferation		yes
YMR228W	MTF1	XIII	724625	725650	RNA polymerase specific factor, mitochondrial	transcription from mitochondrial promoter	yes
YMR241W	YHM2	XIII	751960	752904	yeast suppressor gene of HM (mitochondrial histone) mutant (ABF2)	biological_process unknown	yes
YMR256C	COX7	XIII	779126	778944	cytochrome-c oxidase, subunit VII		yes
YMR257C	PET111	XIII	782030	779628	required for translation of COX2 mRNA	protein biosynthesis	yes
YMR280C	CAT8	XIII	831329	827028	transcription factor involved in gluconeogenesis	gluconeogenesis	yes
YMR282C	AEP2	XIII	835098	833356	required for the expression of subunit-9 of atp synthase	protein biosynthesis	yes
YMR287C	MSU1	XIII	845345	842436	3'-5' exonuclease for RNA 3' ss-tail, mitochondrial		yes
YMR301C	ATM1	XIII	869627	867555	ATP-binding cassette transporter protein, mitochondrial	iron homeostasis	yes
YNL003C	PET8	XIV	625826	624972	similarity to mitochondrial rat tricarboxylate transport protein precursor	biological_process unknown	yes
YNL005C	MRP7	XIV	622425	621310	ribosomal protein YmL2 precursor, mitochondrial	protein biosynthesis	yes
YNL025C	SSN8	XIV	585287	584316	DNA-directed RNA polymerase II holoenzyme and Kornberg's mediator (SRB) subcomplex subunit, cyclin C homolog	repression of transcription from Pol II promoter	yes
YNL037C	IDH1	XIV	558998	557916	isocitrate dehydrogenase (NAD+) subunit 1, mitochondrial	tricarboxylic acid cycle	yes
YNL055C	POR1	XIV	518841	517990	mitochondrial outer membrane porin	transport	yes
YNL098C	RAS2	XIV	440567	439599	GTP-binding protein	pseudohyphal growth	yes
YNL137C	NAM9	XIV	370052	368592	ribosomal protein, mitochondrial	protein biosynthesis	yes
YNL201C		XIV	263200	260624	eak similarity to pleiotropic drug resistance control protein PDR6	biological_process unknown	yes
YNR001C	CIT1	XIV	631058	629619	citrate (si)-synthase, mitochondrial	tricarboxylic acid cycle	yes
YNR023W	SNF12	XIV	670415	672115	component of SWI/SNF global transcription activator complex	chromatin modeling	yes
YNR045W	PET494	XIV	706136	707605	translational activator, mitochondrial	protein biosynthesis	yes
YNR052C	POP2	XIV	720644	719343	required for glucose derepression		yes
YOL001W	PHO80	XV	325249	326130	cyclin	cell cycle	yes
YOL025W	LAG2	XV	274957	276939	involved in determining longevity		yes
YOL096C	COQ3	XV	139056	138106	enzyme of ubiquinone (coenzyme Q) biosynthesis	ubiquinone metabolism	yes
YOL109W	ZEO1	XV	110296	110637	weak similarity to G.hirsutum embryonic abundant protein D-7		yes
YOL147C	PEX11	XV	48641	47931	peroxisomal membrane protein - peroxin	peroxisome organization and biogenesis	yes
YOL148C	SPT20	XV	47572	45758	member of the TBP class of SPT proteins that alter transcription site selection		yes
YOR017W	PET127	XV	361411	363813	component of mitochondrial translation system	RNA processing	yes
YOR125C	CAT5	XV	559847	559029	involved in coenzyme Q (ubiquinone) biosynthesis	ubiquinone metabolism	yes
YOR136W	IDH2	XV	580249	581358	isocitrate dehydrogenase (NAD+) subunit 2. mitochondrial	tricarboxylic acid cycle	yes
YOR158W	PET123	XV	632163	633119	ribosomal protein, mitochondrial	protein biosynthesis	yes
YOR178C	GAC1	XV	670240	667859	ser/thr phosphoprotein phosphatase 1, regulatory chain	meiosis	yes
YOR196C	LIP5	XV	716836	715592	lipoic acid synthase	fatty acid metabolism	yes
YOR201C	PET56	XV	721707	720469	rRNA (guanosine-2'-O-)-methyltransferase	ribosomal large subunit assembly and maintenance	yes
YOR221C	MCT1	XV	757830	756475	malonyl-CoA:ACP transferase	fatty acid metabolism	yes
YOR231W	MKK1	XV	772600	774126	ser/thr protein kinase	protein phosphorylation	yes
YOR278W	HEM4	XV	842813	843640	uroporphyrinogen III synthase		yes
YOR330C	MIP1	XV	943455	939613	DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial	DNA dependent DNA replication	yes
YOR332W	VMA4	XV	943648	944349	H+-ATPase V1 domain 27 KD subunit, vacuolar	vacuolar acidification	yes
YOR334W	MRS2	XV	944588	946000	RNA splicing protein and member of the mitochondrial carrier family (MCF)	mRNA splicing	yes
YOR355W	GDS1	XV	1005130	1006698	NAM9-1 suppressor		yes
YOR358W	HAP5	XV	1010154	1010882	CCAAT-binding factor subunit	respiration	yes
YPL002C	SNF8	XVI	554323	553622	involved in glucose derepression		yes
YPL029W	SUV3	XVI	495502	497715	ATP-dependent RNA helicase, mitochondrial		yes
YPL031C	PHO85	XVI	493033	492014	cyclin-dependent protein kinase	protein phosphorylation	yes
YPL040C	ISM1	XVI	478996	475988			yes
YPL042C	SSN3	XVI	474702	473035	cyclin-dependent CTD kinase	protein phosphorylation	yes
YPL078C	ATP4	XVI	408739	408005	F1F0-ATPase complex, F0 subunit B	ATP synthesis coupled proton transport	yes
YPL097W	MSY1	XVI	364947	366425			yes
YPL104W	MSD1	XVI	355695	357671	aspartate--tRNA ligase, mitochondrial	protein biosynthesis	yes
YPL118W	MRP51	XVI	326627	327661	strong similarity to S.kluyveri hypothetical protein	protein biosynthesis	yes
YPL140C	MKK2	XVI	289033	287513	protein kinase of the map kinase kinase (MEK) family	protein phosphorylation	yes
YPL148C	PPT2	XVI	272826	272293	phosphopantetheine protein transferase	lipid transport	yes
YPL179W	PPQ1	XVI	208156	209805	phosphoprotein phosphatase	translational regulation	yes
YPL254W	HFI1	XVI	69485	70951	transcriptional coactivator	transcription	yes
YPL268W	PLC1	XVI	35236	37845	1-phosphatidylinositol-4.5-bisphosphate phosphodiesterase	pseudohyphal growth	yes
YPL271W	ATP15	XVI	30079	30267	F1F0-ATPase complex, F1 epsilon subunit	ATP synthesis coupled proton transport	yes
YPR024W	YME1	XVI	610476	612719	protease of the SEC18/CDC48/PAS1 family of ATPases (AAA)	mitochondrion organization and biogenesis	yes
YPR026W	ATH1	XVI	615374	619009	acid trehalase, vacuolar	stress response	yes
YPR051W	MAK3	XVI	664955	665485	N-acetyltransferase		yes
YPR133W-A	TOM5	XVI	797552	797704	mitochondrial outer membrane protein	mitochondrial translocation	yes
YPR160W	GPH1	XVI	861301	864009	glycogen phosphorylase		yes
YPR166C	MRP2	XVI	876624	876277	ribosomal protein S14	protein biosynthesis	yes
YPR191W	QCR2	XVI	919376	920482	ubiquinol--cytochrome-c reductase 40KD chain II		yes
YPR198W	SGE1	XVI	934029	935660	drug resistance protein		yes